RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, human

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-223	ENST00000641597	FAM32A	Q9Y421	112 aa	Known RBP	16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	ENPP4	Q9Y6X5	453 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	CCNB2	O95067	398 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	NTN1	O95631	604 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	SERPIND1	P05546	499 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	CHRM5	P08912	532 aa	Predicted RBP	16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	ADRB3	P13945	408 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	HOXB3	P14651	431 aa	Predicted RBP	16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	ST8SIA6	P61647	398 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	TCEA2	Q15560	299 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	TST	Q16762	297 aa	Known RBP	16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	DEF8	Q6ZN54	512 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	IQCF1	Q8N6M8	205 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	OR52A5	Q9H2C5	316 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	SERHL2	Q9H4I8	314 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	ZNF556	Q9HAH1	456 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	LHX9	Q9NQ69	397 aa		16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	SNRNP200	O75643	2136 aa	Known RBP	16.01	■□□□□ 0.15
PHGDH-223	ENST00000641597	PRAMEF27	A3QJZ7	478 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	WWP2	O00308	870 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	TMPRSS11D	O60235	418 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	ENTPD6	O75354	484 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	TIMP1	P01033	207 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	CD72	P21854	359 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	CTNNB1	P35222	781 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	SOX3	P41225	446 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	GJA8	P48165	433 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	MAPK12	P53778	367 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	CAMK1	Q14012	370 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	BCL7A	Q4VC05	210 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	ZNF770	Q6IQ21	691 aa	Predicted RBP	16	■□□□□ 0.15
PHGDH-223	ENST00000641597	PAQR6	Q6TCH4	344 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	PTCHD4	Q6ZW05	846 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	FAM129C	Q86XR2	697 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	LYSMD2	Q8IV50	215 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	TAGAP	Q8N103	731 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	KCNS3	Q9BQ31	491 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	BCL7B	Q9BQE9	202 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	PLCXD1	Q9NUJ7	323 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	FTSJ1	Q9UET6	329 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	ZW10	O43264	779 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	AQP9	O43315	295 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	SH3BP5	O60239	455 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	GRK3	P35626	688 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	MANF	P55145	182 aa	Known RBP	16	■□□□□ 0.15
PHGDH-223	ENST00000641597	RAB15	P59190	212 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	ZNF630	Q2M218	657 aa	Predicted RBP	16	■□□□□ 0.15
PHGDH-223	ENST00000641597	DEPDC1	Q5TB30	811 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	HEATR4	Q86WZ0	1026 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	CXorf40B	Q96DE9	158 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	YIPF4	Q9BSR8	244 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	PRR14	Q9BWN1	585 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597	GIN1	Q9NXP7	522 aa		16	■□□□□ 0.15
PHGDH-223	ENST00000641597		A0A1W2PS29	197 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	AGAP5	A6NIR3	686 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	IFNW1	P05000	195 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	PCCB	P05166	539 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	PPP5C	P53041	499 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	SYPL1	Q16563	259 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	TPRG1L	Q5T0D9	272 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	FRMPD2B	Q6IN97	320 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	CCDC80	Q76M96	950 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	C11orf74	Q86VG3	221 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	ARMC8	Q8IUR7	673 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	APOBEC4	Q8WW27	367 aa	Known RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	TFG	Q92734	400 aa	Predicted RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	TM4SF18	Q96CE8	201 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	XKR8	Q9H6D3	395 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	KCNK12	Q9HB15	430 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	MRPS23	Q9Y3D9	190 aa	Known RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	TRIO	O75962	3097 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	MYO9B	Q13459	2157 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	HEPACAM2	A8MVW5	462 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	CTDSP2	O14595	271 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	LRRTM2	O43300	516 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	LCMT2	O60294	686 aa	Known RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	APOL3	O95236	402 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	RPLP0	P05388	317 aa	Known RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	PIK3CB	P42338	1070 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	WAS	P42768	502 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	PXN	P49023	591 aa	Predicted RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	PIN1	Q13526	163 aa	Predicted RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	SSX1	Q16384	188 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	ZNF750	Q32MQ0	723 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	REEP3	Q6NUK4	255 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	TCTN3	Q6NUS6	607 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	SPATC1	Q76KD6	591 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	PARP16	Q8N5Y8	322 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	KIAA1958	Q8N8K9	716 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	OR2L2	Q8NH16	312 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	WDR36	Q8NI36	951 aa	Known RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	COL21A1	Q96P44	957 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	NLN	Q9BYT8	704 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	RERGL	Q9H628	205 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	MVB12B	Q9H7P6	319 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	ANKRA2	Q9H9E1	313 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	MARK1	Q9P0L2	795 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	ANGPT4	Q9Y264	503 aa		15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	RBMX2	Q9Y388	322 aa	Known RBP	15.99	■□□□□ 0.15
PHGDH-223	ENST00000641597	PRUNE2	Q8WUY3	3088 aa		15.99	■□□□□ 0.15

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms