RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 RPS26P11Q5JNZ5 115 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-211ENST00000641213 PPP2R2DQ66LE6 453 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 EP400NLQ6ZTU2 488 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 C6orf120Q7Z4R8 191 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 ZNF605Q86T29 641 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 FAM20CQ8IXL6 584 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 FAM131CQ96AQ9 280 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 NIPSNAP1Q9BPW8 284 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 CCNB1IP1Q9NPC3 277 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 FZD3Q9NPG1 666 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 POFUT2Q9Y2G5 429 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 GPSM3Q9Y4H4 160 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 ENPP4Q9Y6X5 453 aa16.22■□□□□ 0.19
PHGDH-211ENST00000641213 A0A0A6YYD5 115 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 LRIT2A6NDA9 550 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 BCHEP06276 602 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 FUT4P22083 530 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 NR4A1P22736 598 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 GGT2P36268 569 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 HMGA2P52926 109 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 KRT33BQ14525 404 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 SPCS2Q15005 226 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 CTF1Q16619 201 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 ATAT1Q5SQI0 421 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 OR52E1Q8NGJ3 308 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 ZBED6CLQ96FA7 236 aaPredicted RBP16.21■□□□□ 0.19
PHGDH-211ENST00000641213 C17orf62Q9BQA9 187 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 APOOQ9BUR5 198 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 RAB11FIP5Q9BXF6 653 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 LMCD1Q9NZU5 365 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 PCDHGA2Q9Y5H1 932 aa16.21■□□□□ 0.19
PHGDH-211ENST00000641213 A8MVJ9 347 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 C5orf58C9J3I9 102 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 PCDH17O14917 1159 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 MRPS14O60783 128 aaKnown RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 INHBBP09529 407 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 TFPTP0C1Z6 253 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 MAT2AP31153 395 aaKnown RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 GSSP48637 474 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 TRA2BP62995 288 aaKnown RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 PUM1Q14671 1186 aaKnown RBP eCLIP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 GANABQ14697 944 aaKnown RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 UAP1L1Q3KQV9 507 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 SPDYE7PQ495Y7 208 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 TMEM196Q5HYL7 178 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 ZNF793Q6ZN11 406 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 OR9Q2Q8NGE9 314 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 APOBEC4Q8WW27 367 aaKnown RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 IPCEF1Q8WWN9 437 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 RAB8BQ92930 207 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 TMEM19Q96HH6 336 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 SIGLEC11Q96RL6 698 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 DPH7Q9BTV6 452 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 KLHL31Q9H511 634 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 MRPS30Q9NP92 439 aaKnown RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 PNMA8BQ9ULN7 279 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 FAM32AQ9Y421 112 aaKnown RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 PRICKLE3O43900 615 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 KCNJ13O60928 360 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 STATHP02808 62 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 RHCEP18577 417 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 NTSR1P30989 418 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 BCL6P41182 706 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 SSR2P43308 183 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 ADPRHP54922 357 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 ZIC1Q15915 447 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 SYT6Q5T7P8 510 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 CCDC81Q6ZN84 652 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 PRSS48Q7RTY5 328 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 CROCCP3Q8IVE0 287 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 SVOPQ8N4V2 548 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 TTLQ8NG68 377 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 PSMA8Q8TAA3 256 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 DNASE1L2Q92874 299 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 PSD2Q9BQI7 771 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 MVB12BQ9H7P6 319 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 SLC6A20Q9NP91 592 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 PRDM8Q9NQV8 689 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 ACSS1Q9NUB1 689 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-211ENST00000641213 TAS2R7Q9NYW3 318 aa16.2■□□□□ 0.18
PHGDH-211ENST00000641213 TBC1D3DA0A087WVF3 549 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 TBC1D3IA0A087WXS9 549 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 TBC1D3EA0A087X179 549 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 TBC1D3KA0A087X1G2 549 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 TBC1D3FA6NER0 549 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-211ENST00000641213 PDZK1P1A8MUH7 402 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 TBC1D3LB9A6J9 549 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 HMGN4O00479 90 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 SCAMP1O15126 338 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 GADD45GO95257 159 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 FADS2O95864 444 aaKnown RBP16.19■□□□□ 0.18
PHGDH-211ENST00000641213 DNTTP04053 509 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 IFNW1P05000 195 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 TBC1D3HP0C7X1 549 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 CCT3P49368 545 aaKnown RBP16.19■□□□□ 0.18
PHGDH-211ENST00000641213 CSNK2BP67870 215 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 KCNC4Q03721 635 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 MAPK11Q15759 364 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 NDUFAF5Q5TEU4 345 aa16.19■□□□□ 0.18
PHGDH-211ENST00000641213 TBC1D3GQ6DHY5 549 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms