RNA–Protein interactions for RNA: ENST00000615135.4

FAM228B-209, Transcript of family with sequence similarity 228 member B, humanhuman

TSL 5

Gene FAM228B, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-209ENST00000615135 GNPDA1P46926 289 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 EEFSECP57772 596 aaKnown RBP7.05□□□□□ -1.28
FAM228B-209ENST00000615135 OR1D5P58170 312 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 IRF8Q02556 426 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 GBX1Q14549 363 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 SMU1Q2TAY7 513 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 PTCHD3Q3KNS1 767 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 XKR6Q5GH73 641 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 SLC2A7Q6PXP3 512 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 LIPIQ6XZB0 460 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 RNF165Q6ZSG1 346 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 TMPRSS11BQ86T26 416 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 TRIM74Q86UV6 250 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 HID1Q8IV36 788 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 VRK3Q8IV63 474 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 FUNDC1Q8IVP5 155 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 SULF2Q8IWU5 870 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 DMRTC2Q8IXT2 367 aaPredicted RBP7.05□□□□□ -1.28
FAM228B-209ENST00000615135 SYTL1Q8IYJ3 562 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 TMEM132CQ8N3T6 1108 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 ESX1Q8N693 406 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 GOLM1Q8NBJ4 401 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 GLB1L3Q8NCI6 653 aaPredicted RBP7.05□□□□□ -1.28
FAM228B-209ENST00000615135 CLHC1Q8NHS4 586 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 HM13Q8TCT9 377 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 TSACCQ96A04 125 aaPredicted RBP7.05□□□□□ -1.28
FAM228B-209ENST00000615135 PNPLA2Q96AD5 504 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 RAB7BQ96AH8 199 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 FBXL8Q96CD0 374 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 REPS1Q96D71 796 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 NR1H4Q96RI1 486 aaPredicted RBP7.05□□□□□ -1.28
FAM228B-209ENST00000615135 NTMT1Q9BV86 223 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 ATG10Q9H0Y0 220 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 PCDHAC1Q9H158 963 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 TMEM181Q9P2C4 612 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 RIMS3Q9UJD0 308 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 RNF11Q9Y3C5 154 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 LRRC42Q9Y546 428 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 AP4S1Q9Y587 144 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 PCDHGA6Q9Y5G7 932 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 MRPS18BQ9Y676 258 aaKnown RBP7.05□□□□□ -1.28
FAM228B-209ENST00000615135 V9GYQ6 96 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 CSPG4Q6UVK1 2322 aa7.05□□□□□ -1.28
FAM228B-209ENST00000615135 PRORSD1PA6NEY8 169 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 AQP12BA6NM10 295 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 PRSS44E7EML9 344 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 E7EQ34 232 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 FXYD1O00168 92 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 ZW10O43264 779 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 PEX1O43933 1283 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 TPST1O60507 370 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 CEACAM4O75871 244 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 DNAJB5O75953 348 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 RECQL5O94762 991 aaPredicted RBP7.04□□□□□ -1.28
FAM228B-209ENST00000615135 STK17BO94768 372 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 PDYNP01213 254 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 GPIP06744 558 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 PRPS2P11908 318 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 UQCRBP14927 111 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 IL10P22301 178 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 SLC7A1P30825 629 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 SLC6A12P48065 614 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 GSK3BP49841 420 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 ITGA1P56199 1179 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 PER3P56645 1201 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 MTPNP58546 118 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 SRP54P61011 504 aaKnown RBP7.04□□□□□ -1.28
FAM228B-209ENST00000615135 TBPL1P62380 186 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 PLIN5Q00G26 463 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 LIPEQ05469 1076 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 ABRQ12979 859 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 CHIT1Q13231 466 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 BLMHQ13867 455 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 ERV3-1Q14264 604 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 FAM174BQ3ZCQ3 159 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 AMZ1Q400G9 498 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 BCL7AQ4VC05 210 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 SFT2D3Q587I9 215 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 MTX3Q5HYI7 312 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 THEMIS2Q5TEJ8 643 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 GRHL2Q6ISB3 625 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 LCN8Q6JVE9 175 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 C8orf82Q6P1X6 216 aaPredicted RBP7.04□□□□□ -1.28
FAM228B-209ENST00000615135 TMEM220Q6QAJ8 160 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 CEACAM20Q6UY09 585 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 THOC6Q86W42 341 aaKnown RBP7.04□□□□□ -1.28
FAM228B-209ENST00000615135 SFTPA2Q8IWL1 248 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 AQP12AQ8IXF9 295 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 RASGEF1AQ8N9B8 481 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 TP53I13Q8NBR0 393 aaPredicted RBP7.04□□□□□ -1.28
FAM228B-209ENST00000615135 FAM46DQ8NEK8 389 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 ADCY4Q8NFM4 1077 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 DNAJB14Q8TBM8 379 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 FAM162AQ96A26 154 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 TMEM125Q96AQ2 219 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 PYCR2Q96C36 320 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 SDCCAG3Q96C92 435 aa7.04□□□□□ -1.28
FAM228B-209ENST00000615135 SNRNP40Q96DI7 357 aaKnown RBP7.04□□□□□ -1.28
FAM228B-209ENST00000615135 MTFMTQ96DP5 389 aaKnown RBP7.04□□□□□ -1.28
FAM228B-209ENST00000615135 CMTM7Q96FZ5 175 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms