RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 HS3ST3A1Q9Y663 406 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 GPR179Q6PRD1 2367 aa3.26□□□□□ -1.89
LIG4-205ENST00000614526 TTC28Q96AY4 2481 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SLC9B1P1A6NJY1 282 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 A8MU76 341 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 C5orf58C9J3I9 102 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SGK494L7N484 410 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TNFRSF10CO14798 259 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SUV39H1O43463 412 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ALBP02768 609 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 LINGO3P0C6S8 592 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SLC35G6P0C7Q6 338 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 FCGR1AP12314 374 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ST6GAL1P15907 406 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CDH3P22223 829 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ELK4P28324 431 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 EPHA2P29317 976 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DCTP40126 519 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SEPHS1P49903 392 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ARSFP54793 590 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PIGFQ07326 219 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PDE7AQ13946 482 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 MAP7Q14244 749 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SYPL1Q16563 259 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DUSP7Q16829 419 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 C6orf132Q5T0Z8 1188 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 GCNT6Q5T4J0 391 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CPZQ66K79 652 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR52E8Q6IFG1 317 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ZNF425Q6IV72 752 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ARMC6Q6NXE6 501 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TTC33Q6PID6 262 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 PRR23CQ6ZRP0 262 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ASPGQ86U10 573 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PARGQ86W56 976 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PAQR7Q86WK9 346 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RBM45Q8IUH3 476 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 SYNPOQ8N3V7 929 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 Q8N9G6 341 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR2L5Q8NG80 312 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 OR9A2Q8NGT5 310 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 GPBAR1Q8TDU6 330 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 STARD8Q92502 1023 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 NCSTNQ92542 709 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 MUS81Q96NY9 551 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 NECAB3Q96P71 396 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 KCNC2Q96PR1 638 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 NR1H4Q96RI1 486 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 CCDC3Q9BQI4 270 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ORAI3Q9BRQ5 295 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PRR14Q9BWN1 585 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 OSBPL11Q9BXB4 747 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TOR3AQ9H497 397 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SLC35C2Q9NQQ7 365 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 C1GALT1Q9NS00 363 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 SMPD3Q9NY59 655 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 PDP1Q9P0J1 537 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 MRPS17Q9Y2R5 130 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 SAMHD1Q9Y3Z3 626 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 KCNE3Q9Y6H6 103 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 AP1M2Q9Y6Q5 423 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 FANCMQ8IYD8 2048 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CCDC88CQ9P219 2028 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 A0A0A6YYD5 115 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 KLHL33A6NCF5 533 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 METTL12A8MUP2 240 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 TLR4O00206 839 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DENRO43583 198 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 SLC28A2O43868 658 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PRKNO60260 465 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 KDM1AO60341 852 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 KCNJ13O60928 360 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PRSS23O95084 383 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RASAL1O95294 804 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 FABP3P05413 133 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RETP07949 1114 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 IL7RP16871 459 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 CPN2P22792 545 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 EEF1B2P24534 225 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 NDUFS1P28331 727 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PIGAP37287 484 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 PEX19P40855 299 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 MC3RP41968 323 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 HNRNPFP52597 415 aaKnown RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 MAPK10P53779 464 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 GFERP55789 205 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 DSTNP60981 165 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 ABATP80404 500 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RGS1Q08116 209 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 RUNX2Q13950 521 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 KCNAB1Q14722 419 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 FXNQ16595 210 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 LARP7Q4G0J3 582 aaKnown RBP eCLIP3.25□□□□□ -1.89
LIG4-205ENST00000614526 PRAMEF17Q5VTA0 474 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 FOXB2Q5VYV0 432 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 Q6ZPB1 254 aaPredicted RBP3.25□□□□□ -1.89
LIG4-205ENST00000614526 TMEM26Q6ZUK4 368 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 C11orf74Q86VG3 221 aa3.25□□□□□ -1.89
LIG4-205ENST00000614526 MEX3DQ86XN8 651 aaKnown RBP3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms