RNA–Protein interactions for RNA: ENST00000612130.4

UBE2F-223, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

APPRIS P1 TSL 5 BASIC

Gene UBE2F, Length 2,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-223	ENST00000612130	ZNF8	P17098	575 aa	Predicted RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	PTBP1	P26599	531 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	GK	P32189	559 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	SDC2	P34741	201 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	CHI3L1	P36222	383 aa	Predicted RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	GSTM5	P46439	218 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	CASP9	P55211	416 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	WDR5	P61964	334 aa	Known RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	HEPACAM	Q14CZ8	416 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	CCNJ	Q5T5M9	372 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	METAP1D	Q6UB28	335 aa	Predicted RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	DPY19L3	Q6ZPD9	716 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	USP45	Q70EL2	814 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	GPR156	Q8NFN8	814 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	OR7G3	Q8NG95	312 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	OR5H6	Q8NGV6	325 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	APOBEC4	Q8WW27	367 aa	Known RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	WRAP53	Q9BUR4	548 aa	Known RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	BRD9	Q9H8M2	597 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	MARCH5	Q9NX47	278 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	TRPM5	Q9NZQ8	1165 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	RHCG	Q9UBD6	479 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	ACSL6	Q9UKU0	697 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	HCN2	Q9UL51	889 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	RAB23	Q9ULC3	237 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	NDRG2	Q9UN36	371 aa	Known RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	FFAR1	O14842	300 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	FH	P07954	510 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	CLEC2L	P0C7M8	214 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	IFNA8	P32881	189 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	XK	P51811	444 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	ELAVL2	Q12926	359 aa	Known RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	SLC5A12	Q1EHB4	618 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	LEXM	Q3ZCV2	418 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	RTP2	Q5QGT7	225 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	SLC25A30	Q5SVS4	291 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	C22orf42	Q6IC83	251 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	FUT10	Q6P4F1	479 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZNF730	Q6ZMV8	503 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	USP30	Q70CQ3	517 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	METTL3	Q86U44	580 aa	Known RBP	13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	GPR65	Q8IYL9	337 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	C19orf18	Q8NEA5	215 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	HUS1B	Q8NHY5	278 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	PPCDC	Q96CD2	204 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	SCRN2	Q96FV2	425 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZIC5	Q96T25	663 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	ISYNA1	Q9NPH2	558 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	MAP4K5	Q9Y4K4	846 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	PCDHB7	Q9Y5E2	793 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	PCDHGB7	Q9Y5F8	929 aa		13.1	□□□□□ -0.31
UBE2F-223	ENST00000612130	C12orf71	A8MTZ7	269 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	FAM227A	F5H4B4	570 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	OR2B3	O76000	313 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	FURIN	P09958	794 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PRKAR1A	P10644	381 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	SLC2A2	P11168	524 aa	Predicted RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	FEN1	P39748	380 aa	Known RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	TUFM	P49411	452 aa	Known RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	STK19	P49842	368 aa	Predicted RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	CLDN20	P56880	219 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	RAB25	P57735	213 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	BTBD16	Q32M84	506 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PLK5	Q496M5	336 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	C3orf38	Q5JPI3	329 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	WDR45B	Q5MNZ6	344 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	AGTRAP	Q6RW13	159 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PAMR1	Q6UXH9	720 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	ATP6V1C2	Q8NEY4	427 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	WFDC5	Q8TCV5	224 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	MARVELD3	Q96A59	401 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	TEFM	Q96QE5	360 aa	Known RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	CITED4	Q96RK1	184 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	SOST	Q9BQB4	213 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	ATP13A2	Q9NQ11	1180 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PHF11	Q9UIL8	331 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	MBD1	Q9UIS9	605 aa	Predicted RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PPIL1	Q9Y3C6	166 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	LOC105371267	A0A1B0GV96	52 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	ARHGEF33	A8MVX0	844 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130		H3BN98	237 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	CACNB4	O00305	520 aa	Predicted RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PITPNM1	O00562	1244 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	NOS1AP	O75052	506 aa	Predicted RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	SLC43A1	O75387	559 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	PSIP1	O75475	530 aa	Known RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	SOX14	O95416	240 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	FAM157B	P0CG42	384 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	CYBA	P13498	195 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	ZNF30	P17039	623 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	DDX5	P17844	614 aa	Known RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	ELAVL4	P26378	380 aa	Known RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	LIM2	P55344	173 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	DSTN	P60981	165 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	RPS13	P62277	151 aa	Known RBP	13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	MAB21L1	Q13394	359 aa		13.09	□□□□□ -0.31
UBE2F-223	ENST00000612130	NAE1	Q13564	534 aa		13.09	□□□□□ -0.31

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