RNA–Protein interactions for RNA: ENST00000611571.4

MUC1-223, Transcript of mucin 1, cell surface associated, human

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 4,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC1-223	ENST00000611571	GSTT2	P0CG29	244 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	GSTT2B	P0CG30	244 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	HRH2	P25021	359 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	PDHA2	P29803	388 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	KHK	P50053	298 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	ZNF45	Q02386	682 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	MAD2L1BP	Q15013	274 aa	Predicted RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	RGN	Q15493	299 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	ZNF791	Q3KP31	576 aa	Predicted RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	PRSS48	Q7RTY5	328 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	B3GNT8	Q7Z7M8	397 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	MINDY2	Q8NBR6	621 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	NEIL3	Q8TAT5	605 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	SMPDL3A	Q92484	453 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	TMEM19	Q96HH6	336 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	C11orf84	Q9BUA3	381 aa	Predicted RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	DKK3	Q9UBP4	350 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	SARDH	Q9UL12	918 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	ANKRD36C	Q5JPF3	1778 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	AKAP8	O43823	692 aa	Known RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	SRC	P12931	536 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	ACVR1B	P36896	505 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	STAR	P49675	285 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	CTSC	P53634	463 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	TOMM20	Q15388	145 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	LIPJ	Q5W064	366 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	ENPP7	Q6UWV6	458 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	WDR53	Q7Z5U6	358 aa	Predicted RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	TMEM173	Q86WV6	379 aa	Predicted RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	PAPD5	Q8NDF8	572 aa	Known RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	NEIL2	Q969S2	332 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	MCHR1	Q99705	422 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	OR51I1	Q9H343	314 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	IL37	Q9NZH6	218 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	NUFIP1	Q9UHK0	495 aa	Known RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	PPIE	Q9UNP9	301 aa	Known RBP	13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	BOLA1	Q9Y3E2	137 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	IRAK3	Q9Y616	596 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	SCN1A	P35498	2009 aa		13.27	□□□□□ -0.29
MUC1-223	ENST00000611571	ADAMTSL3	P82987	1691 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	FAM227A	F5H4B4	570 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	SLC25A12	O75746	678 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	FGF18	O76093	207 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	SOX30	O94993	753 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	FUCA1	P04066	466 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	RET	P07949	1114 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	LIN54	Q6MZP7	749 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	LRRTM4	Q86VH4	590 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	RANBP3L	Q86VV4	465 aa	Predicted RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	OR51L1	Q8NGJ5	315 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	SLC39A13	Q96H72	371 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	COMMD9	Q9P000	198 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	MRPL15	Q9P015	296 aa	Known RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	PCDHGB6	Q9Y5F9	930 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571		A0A1B0GVT2	93 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	RBM47	A0AV96	593 aa	Known RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	OR7A17	O14581	309 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	PCDH17	O14917	1159 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	SOD2	P04179	222 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	HLA-DPB1	P04440	258 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	TGFBR1	P36897	503 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	NUP62	P37198	522 aa	Predicted RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	MAGEA12	P43365	314 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	GPR4	P46093	362 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	BNC1	Q01954	994 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	PLEKHS1	Q5SXH7	462 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	OLFML2A	Q68BL7	652 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	MRPL10	Q7Z7H8	261 aa	Known RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571		Q8N402	240 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	SMURF1	Q9HCE7	757 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	EXTL2	Q9UBQ6	330 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	CMAHP	Q9Y471	501 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	IRGM	A1A4Y4	181 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	CDC123	O75794	336 aa	Predicted RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	PNLIPRP1	P54315	467 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	GRIN2C	Q14957	1233 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	TAF13	Q15543	124 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	MTFR2	Q6P444	385 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	CHST4	Q8NCG5	386 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	ZNF548	Q8NEK5	533 aa	Predicted RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	B3GNT7	Q8NFL0	401 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	TSEN15	Q8WW01	171 aa	Known RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	ZNF514	Q96K75	400 aa	Predicted RBP	13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	ENAM	Q9NRM1	1142 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	HCFC1R1	Q9NWW0	138 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	SEC14L4	Q9UDX3	406 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	SLC45A1	Q9Y2W3	748 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	WDR45	Q9Y484	360 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	SPEF1	Q9Y4P9	236 aa		13.26	□□□□□ -0.29
MUC1-223	ENST00000611571	TRIP11	Q15643	1979 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	LOC100509620	A0A075B734	347 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	ATF4	P18848	351 aa	Predicted RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	ACSL1	P33121	698 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	FCHO2	Q0JRZ9	810 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	PROX2	Q3B8N5	592 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	DUS1L	Q6P1R4	473 aa	Known RBP	13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	TAF8	Q7Z7C8	310 aa		13.25	□□□□□ -0.29
MUC1-223	ENST00000611571	KLB	Q86Z14	1044 aa		13.25	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms