RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 NTSP30990 170 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 XCR1P46094 333 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 CCT3P49368 545 aaKnown RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 CLK3P49761 638 aaKnown RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 GNA13Q14344 377 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 NEDD8Q15843 81 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 MICAQ29983 383 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 PROX2Q3B8N5 592 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 NDUFAF5Q5TEU4 345 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 MRM1Q6IN84 353 aaKnown RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 ABHD17CQ6PCB6 329 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 ENPP7Q6UWV6 458 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 TSEN54Q7Z6J9 526 aaKnown RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 FAM124AQ86V42 546 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 MMP21Q8N119 569 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 SMRP1Q8NCR6 262 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 OR4C15Q8NGM1 316 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 SFXN5Q8TD22 340 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 LCN9Q8WX39 176 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 EXOSC8Q96B26 276 aaKnown RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 C12orf43Q96C57 262 aaKnown RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 MS4A6EQ96DS6 147 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 HRASLS5Q96KN8 279 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 NODALQ96S42 347 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 ZNF607Q96SK3 696 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 NRTNQ99748 197 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 C17orf62Q9BQA9 187 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 SLC6A17Q9H1V8 727 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 SLC6A20Q9NP91 592 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 FZD3Q9NPG1 666 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 SLC35C2Q9NQQ7 365 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 SEMA3GQ9NS98 782 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 SIRT3Q9NTG7 399 aaPredicted RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 EXD2Q9NVH0 621 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 TRNAU1APQ9NX07 287 aaKnown RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 TEX10Q9NXF1 929 aaPredicted RBP11.35□□□□□ -0.59
USP6NL-206ENST00000609853 POFUT2Q9Y2G5 429 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 PCDHGA4Q9Y5G9 962 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 HS3ST3A1Q9Y663 406 aa11.35□□□□□ -0.59
USP6NL-206ENST00000609853 REV3LO60673 3130 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 CCDC88CQ9P219 2028 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 MDC1Q14676 2089 aaKnown RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 POM121BA6NF01 834 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 MAN2B1O00754 1011 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 B4GAT1O43505 415 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 SH3BP5O60239 455 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 IFNW1P05000 195 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 CHRM5P08912 532 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 TFPTP0C1Z6 253 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 CALRP27797 417 aaKnown RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 PCSK6P29122 969 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 AKT2P31751 481 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 LTBRP36941 435 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 POLR2IP36954 125 aaKnown RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 PLA2G16P53816 162 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 RPS15AP62244 130 aaKnown RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 IL1RL1Q01638 556 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 TEKQ02763 1124 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 SIM2Q14190 667 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 KIR2DS3Q14952 304 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 COL19A1Q14993 1142 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 XAF1Q6GPH4 301 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 LAIR2Q6ISS4 152 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 FAM92BQ6ZTR7 304 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 RAB2BQ8WUD1 216 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 SLC38A5Q8WUX1 472 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 IPCEF1Q8WWN9 437 aaPredicted RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 OR1E3Q8WZA6 343 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 DTNBP1Q96EV8 351 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 AMDHD1Q96NU7 426 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 BCL7BQ9BQE9 202 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 ROGDIQ9GZN7 287 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 DUSP21Q9H596 190 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 ZNF556Q9HAH1 456 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 FANCEQ9HB96 536 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 PRDM7Q9NQW5 492 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 LYARQ9NX58 379 aaKnown RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 TBC1D29Q9UFV1 150 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 KLF15Q9UIH9 416 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 RAB23Q9ULC3 237 aa11.34□□□□□ -0.59
USP6NL-206ENST00000609853 RANBP2P49792 3224 aaKnown RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 SNRNP200O75643 2136 aaKnown RBP11.34□□□□□ -0.59
USP6NL-206ENST00000609853 ISM1B1AKI9 464 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 HAT1O14929 419 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 ERI3O43414 337 aaKnown RBP11.33□□□□□ -0.6
USP6NL-206ENST00000609853 SERPINB7O75635 380 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 OPN1SWP03999 348 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 ATP5A1P25705 553 aaKnown RBP11.33□□□□□ -0.6
USP6NL-206ENST00000609853 PEBP1P30086 187 aaKnown RBP11.33□□□□□ -0.6
USP6NL-206ENST00000609853 PPP2R1BP30154 601 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 CASP9P55211 416 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 RPP38P78345 283 aaKnown RBP11.33□□□□□ -0.6
USP6NL-206ENST00000609853 SPIBQ01892 262 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 MVKQ03426 396 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 HYAL2Q12891 473 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 HSPB3Q12988 150 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 SLAMF1Q13291 335 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 LAPTM4AQ15012 233 aa11.33□□□□□ -0.6
USP6NL-206ENST00000609853 MAD2L1BPQ15013 274 aaPredicted RBP11.33□□□□□ -0.6
USP6NL-206ENST00000609853 GPR107Q5VW38 600 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms