RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 ROGDIQ9GZN7 287 aa12.4□□□□□ -0.42
POLR2J3-219ENST00000608621 LYRM4Q9HD34 91 aa12.4□□□□□ -0.42
POLR2J3-219ENST00000608621 PRM3Q9NNZ6 103 aa12.4□□□□□ -0.42
POLR2J3-219ENST00000608621 NPDC1Q9NQX5 325 aaPredicted RBP12.4□□□□□ -0.42
POLR2J3-219ENST00000608621 PNPLA3Q9NST1 481 aa12.4□□□□□ -0.42
POLR2J3-219ENST00000608621 TXNDC16Q9P2K2 825 aa12.4□□□□□ -0.42
POLR2J3-219ENST00000608621 PHF3Q92576 2039 aaKnown RBP12.4□□□□□ -0.42
POLR2J3-219ENST00000608621 CELSR1Q9NYQ6 3014 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 GLSO94925 669 aaPredicted RBP12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 ETHE1O95571 254 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 TGFB1P01137 390 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 ATP5A1P25705 553 aaKnown RBP12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 GMPRP36959 345 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 CASP2P42575 452 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 MAGEA5P43359 124 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 DNASE1L1P49184 302 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 TFF3Q07654 80 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 AP5B1Q2VPB7 878 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 NDUFAF5Q5TEU4 345 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 ZNF585AQ6P3V2 769 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 OPN5Q6U736 354 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 GK5Q6ZS86 529 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 FAM47EQ6ZV65 393 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 CHSY3Q70JA7 882 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 OR4N5Q8IXE1 308 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 TMEM251Q8N6I4 163 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 PDPRQ8NCN5 879 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 OR10Q1Q8NGQ4 319 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 ZNF721Q8TF20 911 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 ZNF473Q8WTR7 871 aaKnown RBP12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 CDKL2Q92772 493 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 EXT2Q93063 718 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 UBXN10Q96LJ8 280 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 SMC6Q96SB8 1091 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 GPR22Q99680 433 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 RBBP8Q99708 897 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 CPNE1Q99829 537 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 MS4A8Q9BY19 250 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 SAYSD1Q9NPB0 183 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 SACM1LQ9NTJ5 587 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 TNFRSF10DQ9UBN6 386 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 RNF112Q9ULX5 631 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 LIPGQ9Y5X9 500 aa12.39□□□□□ -0.43
POLR2J3-219ENST00000608621 C2CD3Q4AC94 2353 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 FOXO6A8MYZ6 492 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 SAP18O00422 153 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 IGHG3P01860 377 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 S100BP04271 92 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 P04436 131 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 PCNAP12004 261 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 CPN2P22792 545 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 MSX1P28360 303 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 RAB10P61026 200 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 ASPHQ12797 758 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 SLC10A1Q14973 349 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 TBCCQ15814 346 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 PIGGQ5H8A4 983 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 SPNS3Q6ZMD2 512 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 C3orf62Q6ZUJ4 267 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 CYS1Q717R9 158 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 TRILQ7L0X0 811 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 DMRTC2Q8IXT2 367 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 GOLM1Q8NBJ4 401 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 BBOF1Q8ND07 529 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 PPWD1Q96BP3 646 aaKnown RBP12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 SENP5Q96HI0 755 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 SGCZQ96LD1 299 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 NAPGQ99747 312 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 PHACTR1Q9C0D0 580 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 DPH5Q9H2P9 285 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 IL1RL2Q9HB29 575 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 SEMA4BQ9NPR2 832 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 TUBA8Q9NY65 449 aaPredicted RBP12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 COPS7AQ9UBW8 275 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 SPACA6W5XKT8 324 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 SPG11Q96JI7 2443 aa12.38□□□□□ -0.43
POLR2J3-219ENST00000608621 A0A1B0GVC2 190 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ATP6AP2A0A1C7CYW4 349 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 TCRBV9S1A1TA0A576 114 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 OR14I1A6ND48 311 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 FAM159BA6NKW6 160 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 BCKDKO14874 412 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ATP6AP2O75787 350 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 HOXD4P09016 255 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 CELA3AP09093 270 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 CCL3P10147 92 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 HIST1H1TP22492 207 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ACVR2AP27037 513 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 SPRP35270 261 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 GP5P40197 560 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 MAN2A2P49641 1150 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 FOXO1Q12778 655 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 SLAMF1Q13291 335 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 E2F2Q14209 437 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 ZKSCAN8Q15776 578 aaPredicted RBP12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 MPEG1Q2M385 716 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 TMEM35AQ53FP2 167 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 DEPDC1Q5TB30 811 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 RTL6Q6ICC9 239 aa12.37□□□□□ -0.43
POLR2J3-219ENST00000608621 OR4C11Q6IEV9 310 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms