RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 LGI4Q8N135 537 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 FBXL6Q8N531 539 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 SMYD1Q8NB12 490 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 APH1BQ8WW43 257 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 ZBED6CLQ96FA7 236 aaPredicted RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 CSF3RQ99062 836 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 PSD2Q9BQI7 771 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 DPH7Q9BTV6 452 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 SERHL2Q9H4I8 314 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 KLHL31Q9H511 634 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 GPN2Q9H9Y4 310 aaPredicted RBP14.96□□□□□ -0.01
MBD1-227ENST00000592060 RLIMQ9NVW2 624 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 LMCD1Q9NZU5 365 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 PCDHGA6Q9Y5G7 932 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 PCDHGA10Q9Y5H3 936 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 ENPP4Q9Y6X5 453 aa14.96□□□□□ -0.01
MBD1-227ENST00000592060 TBC1D3DA0A087WVF3 549 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3IA0A087WXS9 549 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3EA0A087X179 549 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3KA0A087X1G2 549 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3FA6NER0 549 aaPredicted RBP14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3LB9A6J9 549 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 SLC31A1O15431 190 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 PCDHGA12O60330 932 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 INMTO95050 263 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 KLF8O95600 359 aaPredicted RBP14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3HP0C7X1 549 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 HOXB3P14651 431 aaPredicted RBP14.95□□□□□ -0.02
MBD1-227ENST00000592060 CCNA2P20248 432 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 CTHP32929 405 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 KRT20P35900 424 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 SSR2P43308 183 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 EMP3P54852 163 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 KIAA1024LP59773 190 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 ABATP80404 500 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 EMX1Q04741 257 aaPredicted RBP14.95□□□□□ -0.02
MBD1-227ENST00000592060 HTR4Q13639 388 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 KRT33BQ14525 404 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 SMN1Q16637 294 aaKnown RBP14.95□□□□□ -0.02
MBD1-227ENST00000592060 MICAQ29983 383 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 PROX2Q3B8N5 592 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 C11orf91Q3C1V1 193 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 RPS26P11Q5JNZ5 115 aaPredicted RBP14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3GQ6DHY5 549 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3CQ6IPX1 549 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 SDE2Q6IQ49 451 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 SLC16A12Q6ZSM3 486 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 MTSS1LQ765P7 747 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 C6orf120Q7Z4R8 191 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 ENTHD1Q8IYW4 607 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 TBC1D3Q8IZP1 549 aaPredicted RBP14.95□□□□□ -0.02
MBD1-227ENST00000592060 OR2L3Q8NG85 312 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 SLC38A5Q8WUX1 472 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 ASB12Q8WXK4 309 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 TMEM19Q96HH6 336 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 OR2M4Q96R27 311 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 SIGLEC11Q96RL6 698 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 PIP5K1AQ99755 562 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 C17orf62Q9BQA9 187 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 SARGQ9BW04 601 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 DGCR6LQ9BY27 220 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 ACER3Q9NUN7 267 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 PCDHGA2Q9Y5H1 932 aa14.95□□□□□ -0.02
MBD1-227ENST00000592060 PRSS38A1L453 326 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 ZNF99A8MXY4 864 aaPredicted RBP14.94□□□□□ -0.02
MBD1-227ENST00000592060 SCAMP1O15126 338 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 SERPIND1P05546 499 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 BCHEP06276 602 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 HOXC4P09017 264 aaPredicted RBP14.94□□□□□ -0.02
MBD1-227ENST00000592060 TFPTP0C1Z6 253 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 ANXA8P13928 327 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 DRD2P14416 443 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 ACVR2AP27037 513 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 HTR1BP28222 390 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 STT3AP46977 705 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 MASP1P48740 699 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 HMGA2P52926 109 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 DCTN2Q13561 401 aaKnown RBP14.94□□□□□ -0.02
MBD1-227ENST00000592060 NPTX1Q15818 432 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 OR52J3Q8NH60 311 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 TANKQ92844 425 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 UBE2FQ969M7 185 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 RIPOR3Q96MK2 946 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 KCNC2Q96PR1 638 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 RHNO1Q9BSD3 238 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 FUNDC2Q9BWH2 189 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 RSPO3Q9BXY4 272 aaPredicted RBP14.94□□□□□ -0.02
MBD1-227ENST00000592060 CCDC90BQ9GZT6 254 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 KIR3DX1Q9H7L2 352 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 SCN3BQ9NY72 215 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 SPHK1Q9NYA1 384 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 EHD3Q9NZN3 535 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 POFUT2Q9Y2G5 429 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 MDC1Q14676 2089 aaKnown RBP14.94□□□□□ -0.02
MBD1-227ENST00000592060 HMGN4O00479 90 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 MRPS14O60783 128 aaKnown RBP14.94□□□□□ -0.02
MBD1-227ENST00000592060 STATHP02808 62 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 FUT4P22083 530 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 AHRP35869 848 aa14.94□□□□□ -0.02
MBD1-227ENST00000592060 GGT2P36268 569 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms