RNA–Protein interactions for RNA: ENST00000591782.1

VMP1-212, Transcript of vacuole membrane protein 1, humanhuman

TSL 5

Gene VMP1, Length 729 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-212ENST00000591782 BEST1O76090 585 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 AHSA1O95433 338 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 RAB3DO95716 219 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SNAP29O95721 258 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 APOC1P02654 83 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 CALB1P05937 261 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SP1P08047 785 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 LINGO3P0C6S8 592 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 UBTFL1P0CB47 393 aaPredicted RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 MCF2P10911 925 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 GHRP10912 638 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 MX1P20591 662 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SAT1P21673 171 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 CCNE1P24864 410 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 PCK1P35558 622 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 TIMP3P35625 211 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 DCTP40126 519 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 MAGEA11P43364 429 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 GSSP48637 474 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 POU3F4P49335 361 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 FHITP49789 147 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 HSD17B4P51659 736 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ARSEP51690 589 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SLC12A3P55017 1021 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 YWHAEP62258 255 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 HPCAP84074 193 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 PRKAA1Q13131 559 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ART3Q13508 389 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ITGA9Q13797 1035 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 MELKQ14680 651 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SMCO1Q147U7 214 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 FASTKD3Q14CZ7 662 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 TRADDQ15628 312 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 USF2Q15853 346 aaPredicted RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 FAM83EQ2M2I3 478 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 PARP6Q2NL67 630 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ASPRV1Q53RT3 343 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 YIF1BQ5BJH7 314 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 TMEM31Q5JXX7 168 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 CCNYL2Q5T2Q4 361 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 C1orf185Q5T7R7 199 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 LIN9Q5TKA1 542 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 METTL21CQ5VZV1 264 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 KRT79Q5XKE5 535 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 FAM109BQ6ICB4 259 aaPredicted RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 C1orf94Q6P1W5 598 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 LRRC8BQ6P9F7 803 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 METAP1DQ6UB28 335 aaPredicted RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 SLFN11Q7Z7L1 901 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ADAMTSL2Q86TH1 951 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 LDB1Q86U70 411 aaPredicted RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 PRPF39Q86UA1 669 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 METTL23Q86XA0 190 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 TBC1D10CQ8IV04 446 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SCML4Q8N228 414 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 KLHDC9Q8NEP7 349 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 OR6Q1Q8NGQ2 317 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ZNF461Q8TAF7 563 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 WDR20Q8TBZ3 569 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ZNF473Q8WTR7 871 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 DNAJA4Q8WW22 397 aaPredicted RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 SLC5A11Q8WWX8 675 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 STMN2Q93045 179 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 RFT1Q96AA3 541 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 CCDC127Q96BQ5 260 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 FAM20AQ96MK3 541 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 TESK2Q96S53 571 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ATP6V0BQ99437 205 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 OLFM1Q99784 485 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 UBAC1Q9BSL1 405 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 CNPY3Q9BT09 278 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 THUMPD3Q9BV44 507 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 NUP58Q9BVL2 599 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 TIPINQ9BVW5 301 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 TEKT3Q9BXF9 490 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 TEX12Q9BXU0 123 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 CALN1Q9BXU9 219 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SLC22A4Q9H015 551 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SPATC1LQ9H0A9 340 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SLC26A1Q9H2B4 701 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 BLZF1Q9H2G9 400 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 CUEDC2Q9H467 287 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 OSGEPL1Q9H4B0 414 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 APOBEC3GQ9HC16 384 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 SLC40A1Q9NP59 571 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 C19orf12Q9NSK7 152 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SLC38A7Q9NVC3 462 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 FAM120CQ9NX05 1096 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 NPAP1Q9NZP6 1156 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 RCOR3Q9P2K3 495 aaPredicted RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 CACNG4Q9UBN1 327 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 TRMT6Q9UJA5 497 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 DNAJC12Q9UKB3 198 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 GMEB2Q9UKD1 530 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ENTPD4Q9Y227 616 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 CHKBQ9Y259 395 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 ERGIC3Q9Y282 383 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 SAMHD1Q9Y3Z3 626 aaKnown RBP3.22□□□□□ -1.89
VMP1-212ENST00000591782 SNAPC4Q5SXM2 1469 aa3.22□□□□□ -1.89
VMP1-212ENST00000591782 PHLPP2Q6ZVD8 1323 aa3.21□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms