RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 TPP2P29144 1249 aaPredicted RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 BSGP35613 385 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 CCT5P48643 541 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 CYB561P49447 251 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 ARFIP1P53367 373 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 HERVK_113P63132 956 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 TRAF3Q13114 568 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 TERF2Q15554 542 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 MAPKAPK3Q16644 382 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 SLC25A25Q6KCM7 469 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 ZCCHC7Q8N3Z6 543 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 TMEM156Q8N614 296 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 APCDD1LQ8NCL9 501 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 ST6GALNAC3Q8NDV1 305 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 C7orf57Q8NEG2 295 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 DNAJB8Q8NHS0 232 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 PTPMT1Q8WUK0 201 aaPredicted RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 SELENOMQ8WWX9 145 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.27□□□□□ -0.61
TPM4-212ENST00000590180 TANKQ92844 425 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 ANKRD9Q96BM1 317 aaPredicted RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 PPWD1Q96BP3 646 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 RBM18Q96H35 190 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 TAAR6Q96RI8 345 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 ERVK-6Q9BXR3 956 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 OR8D2Q9GZM6 311 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 DDX31Q9H8H2 851 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 ANKZF1Q9H8Y5 726 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 LIN28AQ9H9Z2 209 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 WDR41Q9HAD4 459 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 LYARQ9NX58 379 aaKnown RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 SNX6Q9UNH7 406 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 ATG4BQ9Y4P1 393 aa11.27□□□□□ -0.61
TPM4-212ENST00000590180 USP9XQ93008 2570 aaPredicted RBP11.27□□□□□ -0.61
TPM4-212ENST00000590180 SPTBN1Q01082 2364 aaKnown RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 HIVEP3Q5T1R4 2406 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 PTPN13Q12923 2485 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 A0A1B0GTL3 188 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 ARHGAP10A1A4S6 786 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 CLEC18AA5D8T8 446 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 GLOD5A6NK44 160 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 WASHC1A8K0Z3 465 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 PROM1O43490 865 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 TMPRSS11DO60235 418 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 FGF17O60258 216 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 SEMA7AO75326 666 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 PRKRAO75569 313 aaKnown RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 OR4F21O95013 312 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 PDYNP01213 254 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 KLK1P06870 262 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 SP1P08047 785 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 COX7A2P14406 83 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 BUD31P41223 144 aaPredicted RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 HLCSP50747 726 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 GPR143P51810 404 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 PRKAA2P54646 552 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 HNRNPH2P55795 449 aaKnown RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 BIKQ13323 160 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 INAQ16352 499 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 ZNF678Q5SXM1 525 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 C10orf62Q5T681 223 aaPredicted RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 ZNF468Q5VIY5 522 aaPredicted RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 CLEC18BQ6UXF7 455 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 HSDL2Q6YN16 418 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 NUDT13Q86X67 352 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 SLC22A9Q8IVM8 553 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 CCNYL1Q8N7R7 359 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 TMEM178AQ8NBL3 297 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 CLEC18CQ8NCF0 446 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 MORN4Q8NDC4 146 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 MDS2Q8NDY4 140 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 OR14A16Q8NHC5 309 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 DOK4Q8TEW6 326 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 MZB1Q8WU39 189 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 TMEM125Q96AQ2 219 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 DGAT2Q96PD7 388 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 C1QTNF3Q9BXJ4 246 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 HES7Q9BYE0 225 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 NMRK1Q9NWW6 199 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 PPIEQ9UNP9 301 aaKnown RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 SLC12A4Q9UP95 1085 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 OSGIN2Q9Y236 505 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 ASB4Q9Y574 426 aa11.26□□□□□ -0.61
TPM4-212ENST00000590180 SETXQ7Z333 2677 aaKnown RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 SPTAN1Q13813 2472 aaKnown RBP11.26□□□□□ -0.61
TPM4-212ENST00000590180 A0A0A6YYD5 115 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 A0A1W2PR48 441 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 CDK2AP1O14519 115 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 DYRK3O43781 588 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 GLRA3O75311 464 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 ITGA10O75578 1167 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 NEURL1O76050 574 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 SEMA3DO95025 777 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 SLU7O95391 586 aaKnown RBP11.25□□□□□ -0.61
TPM4-212ENST00000590180 GPR75O95800 540 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 KRT6AP02538 564 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 KRT6BP04259 564 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 MYL2P10916 166 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 STT3AP46977 705 aa11.25□□□□□ -0.61
TPM4-212ENST00000590180 KRT6CP48668 564 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms