RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	FAM72B	Q86X60	149 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TREML1	Q86YW5	311 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TRIM59	Q8IWR1	403 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	TRIM42	Q8IWZ5	723 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	NELFCD	Q8IXH7	590 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	GSPT2	Q8IYD1	628 aa	Known RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772		Q8N1X5	172 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF610	Q8N9Z0	462 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	FBXL13	Q8NEE6	735 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	WFDC9	Q8NEX5	89 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	OR4M2	Q8NGB6	313 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	PIWIL2	Q8TC59	973 aa	Known RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	ASB15	Q8WXK1	588 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	KISS1R	Q969F8	398 aa	Predicted RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	CTHRC1	Q96CG8	243 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	ZNF845	Q96IR2	970 aa	Predicted RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	RBM41	Q96IZ5	413 aa	Known RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	CSPG4P5	Q96PW8	444 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	SMIM14	Q96QK8	99 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	ATOH8	Q96SQ7	321 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC30A3	Q99726	388 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	MGME1	Q9BQP7	344 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	SLC30A2	Q9BRI3	323 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	YIPF2	Q9BWQ6	316 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	RACGAP1	Q9H0H5	632 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	GAN	Q9H2C0	597 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	UBQLN3	Q9H347	655 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	XKR8	Q9H6D3	395 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	EDA2R	Q9HAV5	297 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	INTS7	Q9NVH2	962 aa	Known RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	RAB20	Q9NX57	234 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	UBP1	Q9NZI7	540 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	UTS2R	Q9UKP6	389 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	PPIE	Q9UNP9	301 aa	Known RBP	4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	GPR52	Q9Y2T5	361 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	CAPN6	Q9Y6Q1	641 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	PMF1-BGLAP	U3KQ54	211 aa		4.37	□□□□□ -1.71
MSI2-216	ENST00000582772	HEATR5B	Q9P2D3	2071 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772		A0A0A6YYK5	440 aa	Predicted RBP	4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	DPRX	A6NFQ7	191 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ERICH4	A6NGS2	130 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772		E7EQL1	145 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772		H0YIG0	161 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	PJA2	O43164	708 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ZFAND5	O76080	213 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ACTL6A	O96019	429 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772		P04436	131 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CCL3	P10147	92 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	GATA3	P23771	443 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	GRK3	P35626	688 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	MAGEA1	P43355	309 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	VEGFC	P49767	419 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	MRPS25	P82663	173 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CHRNB3	Q05901	458 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	LRRC63	Q05C16	580 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ACTN3	Q08043	901 aa	Predicted RBP	4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	DBP	Q10586	325 aa	Predicted RBP	4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CCNI	Q14094	377 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CASP8	Q14790	479 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	TYSND1	Q2T9J0	566 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	HKDC1	Q2TB90	917 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ANKRD20A8P	Q5CZ79	823 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	DNAJC21	Q5F1R6	531 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM205BP	Q63HN1	556 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	WDR93	Q6P2C0	686 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	IL20RB	Q6UXL0	311 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	FAM183BP	Q6ZVS7	135 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ATG4D	Q86TL0	474 aa	Predicted RBP	4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CREG2	Q8IUH2	290 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CCDC65	Q8IXS2	484 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	MMGT1	Q8N4V1	131 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	RASGEF1A	Q8N9B8	481 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	GPR26	Q8NDV2	337 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	NEK11	Q8NG66	645 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	OR4S1	Q8NGB4	309 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	DTX3L	Q8TDB6	740 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ZUFSP	Q96AP4	578 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CABS1	Q96KC9	395 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CEP63	Q96MT8	703 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CRACR2A	Q9BSW2	395 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	CNPY3	Q9BT09	278 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	TRMO	Q9BU70	441 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	PACSIN1	Q9BY11	444 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	DRC3	Q9H069	523 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	SIX2	Q9NPC8	291 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	NLRC4	Q9NPP4	1024 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	PLEK2	Q9NYT0	353 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	PRODH2	Q9UF12	536 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ZC3H7B	Q9UGR2	993 aa	Known RBP	4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	OPN4	Q9UHM6	478 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	KCNG2	Q9UJ96	466 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	ADAM29	Q9UKF5	820 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	SNX12	Q9UMY4	172 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	PCDHB14	Q9Y5E9	798 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	SAR1B	Q9Y6B6	198 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	DOCK11	Q5JSL3	2073 aa		4.36	□□□□□ -1.71
MSI2-216	ENST00000582772	NPIPA5	A0A0B4J1W7	369 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	C1orf232	A0A0U1RR37	186 aa		4.35	□□□□□ -1.71
MSI2-216	ENST00000582772	NPIPA7	E9PJI5	369 aa		4.35	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms