RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 MAU2Q9Y6X3 613 aa9.8□□□□□ -0.84
CCDC47-203ENST00000580986 SPTBN2O15020 2390 aa9.8□□□□□ -0.84
CCDC47-203ENST00000580986 AHCTF1Q8WYP5 2266 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 SCN3AQ9NY46 2000 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 IGKV3D-11A0A0A0MRZ8 115 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 A0A0G2JND7 137 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 GOLGA8QA0A0J9YX86 632 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 TEX51A0A1B0GUA7 166 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 A0A1W2PR48 441 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 GOLGA8OA6NCC3 632 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 TMEM8BA6NDV4 472 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 GOLGA8NF8WBI6 632 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 ANKRD28O15084 1053 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 UBDO15205 165 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CTNSO60931 367 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 AIFM1O95831 613 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 FAM107AO95990 144 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 IGHEP01854 428 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 ALDOCP09972 364 aaKnown RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 TCN2P20062 427 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 DDCP20711 480 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CPN2P22792 545 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 PTPN4P29074 926 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 ADSLP30566 484 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 ARFIP2P53365 341 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CLDN8P56748 225 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 TAS2R50P59544 299 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 RPS15P62841 145 aaKnown RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 IGLV3-21P80748 117 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 MAT1AQ00266 395 aaKnown RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 FOXK2Q01167 660 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 DNASE1L3Q13609 305 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 SERTAD2Q14140 314 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CEBPEQ15744 281 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 PDCD4Q53EL6 469 aaKnown RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 IL23RQ5VWK5 629 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 LCN10Q6JVE6 187 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 SLC48A1Q6P1K1 146 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 SPATA21Q7Z572 469 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 R3HCC1LQ7Z5L2 792 aaKnown RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 PIGWQ7Z7B1 504 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CPLX4Q7Z7G2 160 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 RIMKLAQ8IXN7 391 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 METTL27Q8N6F8 245 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 IL22RA1Q8N6P7 574 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 GLB1L3Q8NCI6 653 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 DNAJB14Q8TBM8 379 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CT55Q8WUE5 264 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 KIAA1143Q96AT1 154 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 TESCQ96BS2 214 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 PEX11GQ96HA9 241 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 IP6K3Q96PC2 410 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 TMEM120AQ9BXJ8 343 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CCDC86Q9H6F5 360 aaKnown RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 RPF2Q9H7B2 306 aaKnown RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 AKIRIN1Q9H9L7 192 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 SEMA3GQ9NS98 782 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 TEX10Q9NXF1 929 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 ZIM2Q9NZV7 527 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 HCN3Q9P1Z3 774 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 DCTN4Q9UJW0 460 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CROTQ9UKG9 612 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 CES1P1Q9UKY3 287 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 PSME2Q9UL46 239 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 TCFL5Q9UL49 500 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 FARSAQ9Y285 508 aaKnown RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 POLR3HQ9Y535 204 aaPredicted RBP9.79□□□□□ -0.84
CCDC47-203ENST00000580986 GPR45Q9Y5Y3 372 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 AKAP13Q12802 2813 aa9.79□□□□□ -0.84
CCDC47-203ENST00000580986 IDSB3KWA1 339 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 SLC22A2O15244 555 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 CNOT3O75175 753 aaKnown RBP9.78□□□□□ -0.84
CCDC47-203ENST00000580986 GBAP04062 536 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 IL3P08700 152 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 IFI6P09912 130 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 FURINP09958 794 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 G6PDP11413 515 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 TACR1P25103 407 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 GALNSP34059 522 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 HPCAL1P37235 193 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 CLNS1AP54105 237 aaKnown RBP9.78□□□□□ -0.84
CCDC47-203ENST00000580986 DIO3P55073 304 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 OLR1P78380 273 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 RHAGQ02094 409 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 CLN3Q13286 438 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 SSPNQ14714 243 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 TERF2Q15554 542 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 SYT16Q17RD7 645 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 VWA2Q5GFL6 755 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 CPZQ66K79 652 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 NXNQ6DKJ4 435 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 FAM199XQ6PEV8 388 aaPredicted RBP9.78□□□□□ -0.84
CCDC47-203ENST00000580986 TMEM205Q6UW68 189 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 LIX1Q8N485 282 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 ENDOVQ8N8Q3 282 aaKnown RBP9.78□□□□□ -0.84
CCDC47-203ENST00000580986 ANKS4BQ8N8V4 417 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 VPS50Q96JG6 964 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 SLC45A3Q96JT2 553 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 PPP1R36Q96LQ0 422 aa9.78□□□□□ -0.84
CCDC47-203ENST00000580986 CSF3RQ99062 836 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms