RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 HNRNPKP61978 463 aaKnown RBP eCLIP19.23■□□□□ 0.67
SMG8-203ENST00000578922 ZNF829Q3KNS6 432 aaPredicted RBP19.23■□□□□ 0.67
SMG8-203ENST00000578922 FCRL6Q6DN72 434 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 OR4C11Q6IEV9 310 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 FBXO42Q6P3S6 717 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 FIGLAQ6QHK4 219 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 ARL14Q8N4G2 192 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 MIPOL1Q8TD10 442 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 BORCS5Q969J3 196 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 COQ8BQ96D53 544 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 SOX17Q9H6I2 414 aaPredicted RBP19.23■□□□□ 0.67
SMG8-203ENST00000578922 MIEF1Q9NQG6 463 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 USE1Q9NZ43 259 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 ATP6V1HQ9UI12 483 aa19.23■□□□□ 0.67
SMG8-203ENST00000578922 G3V2T6 193 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 SCELO95171 688 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 PPM1FP49593 454 aaPredicted RBP19.22■□□□□ 0.67
SMG8-203ENST00000578922 SLC14A1Q13336 389 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 TMED1Q13445 227 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 ZNF793Q6ZN11 406 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 MSANTD1Q6ZTZ1 278 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 STK32CQ86UX6 486 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 C8orf59Q8N0T1 100 aaPredicted RBP19.22■□□□□ 0.67
SMG8-203ENST00000578922 HDAC2Q92769 488 aaKnown RBP19.22■□□□□ 0.67
SMG8-203ENST00000578922 TM4SF18Q96CE8 201 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 MS4A6EQ96DS6 147 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 PHF12Q96QT6 1004 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 CPPED1Q9BRF8 314 aaPredicted RBP19.22■□□□□ 0.67
SMG8-203ENST00000578922 IER2Q9BTL4 223 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 C5AR2Q9P296 337 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 TECTAO75443 2155 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 ABCB7O75027 752 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 SEC14L2O76054 403 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 HOXB9P17482 250 aaPredicted RBP19.22■□□□□ 0.67
SMG8-203ENST00000578922 VN1R4Q7Z5H5 301 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 KCT2Q8NC54 265 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 OR8K5Q8NH50 307 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 UCN3Q969E3 161 aa19.22■□□□□ 0.67
SMG8-203ENST00000578922 TEX10Q9NXF1 929 aaPredicted RBP19.22■□□□□ 0.67
SMG8-203ENST00000578922 VPS13AQ96RL7 3174 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 OR2A25A4D2G3 310 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 EEF1B2P24534 225 aaKnown RBP19.21■□□□□ 0.67
SMG8-203ENST00000578922 RPS15AP62244 130 aaKnown RBP19.21■□□□□ 0.67
SMG8-203ENST00000578922 CSTF1Q05048 431 aaKnown RBP19.21■□□□□ 0.67
SMG8-203ENST00000578922 C16orf72Q14CZ0 275 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 NEDD8Q15843 81 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 MPEG1Q2M385 716 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 Q6ZNX1 250 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 R3HCC1LQ7Z5L2 792 aaKnown RBP19.21■□□□□ 0.67
SMG8-203ENST00000578922 CAMKMTQ7Z624 323 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 OOSP2Q86WS3 158 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 VPS37AQ8NEZ2 397 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 OR4A15Q8NGL6 344 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 QRFPRQ96P65 431 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 SARGQ9BW04 601 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 TWSG1Q9GZX9 223 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 MAGIXQ9H6Y5 334 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 TBC1D23Q9NUY8 699 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 MAPRE3Q9UPY8 281 aa19.21■□□□□ 0.67
SMG8-203ENST00000578922 hCG_2014768A0A024R1R8 64 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 OR5K3A6NET4 321 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 LAMTOR5O43504 91 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 SH3BP5O60239 455 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 NOBOXO60393 691 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 IL1RNP18510 177 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 TRPC1P48995 793 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 GABARAPL2P60520 117 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 SNRPNP63162 240 aaKnown RBP19.2■□□□□ 0.66
SMG8-203ENST00000578922 PDE7AQ13946 482 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 TMEM35AQ53FP2 167 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 ANXA8L1Q5VT79 327 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 ARMC6Q6NXE6 501 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 ZNF555Q8NEP9 628 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 TBC1D15Q8TC07 691 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 FIG4Q92562 907 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 RBM4BQ9BQ04 359 aaKnown RBP19.2■□□□□ 0.66
SMG8-203ENST00000578922 RBM4Q9BWF3 364 aaKnown RBP19.2■□□□□ 0.66
SMG8-203ENST00000578922 OSBPL10Q9BXB5 764 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 SLC6A16Q9GZN6 736 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 TMEM74BQ9NUR3 256 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 ATAD3AQ9NVI7 634 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 BLOC1S6Q9UL45 172 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 ENTPD2Q9Y5L3 495 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 A0A1W2PPW3 197 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 ELOVL7A1L3X0 281 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 FAM221BA6H8Z2 402 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 C6orf47O95873 294 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 RETP07949 1114 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 CCNA2P20248 432 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 GSTM2P28161 218 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 TOP3AQ13472 1001 aaPredicted RBP19.2■□□□□ 0.66
SMG8-203ENST00000578922 ZIK1Q3SY52 487 aaPredicted RBP19.2■□□□□ 0.66
SMG8-203ENST00000578922 LYSMD4Q5XG99 296 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 FRMPD2BQ6IN97 320 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 IKBIPQ70UQ0 350 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 ASPGQ86U10 573 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 RAB2BQ8WUD1 216 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 EDAQ92838 391 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 HSPBAP1Q96EW2 488 aa19.2■□□□□ 0.66
SMG8-203ENST00000578922 BHLHE41Q9C0J9 482 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms