RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 MAGIXQ9H6Y5 334 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 LAG3P18627 525 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 XKP51811 444 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 ITGA1P56199 1179 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 PROX2Q3B8N5 592 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 SLC35F1Q5T1Q4 408 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 OR2G6Q5TZ20 316 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 GET4Q7L5D6 327 aaPredicted RBP13.03□□□□□ -0.32
NDEL1-204ENST00000578172 HORMAD2Q8N7B1 307 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 TMEM145Q8NBT3 493 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 ADAMTS16Q8TE57 1224 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 SUSD6Q92537 303 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 TESCQ96BS2 214 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 DIRAS2Q96HU8 199 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 CEP295NLQ96MC4 621 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 C12orf66Q96MD2 445 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 IRF2BPLQ9H1B7 796 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 CXorf36Q9H7Y0 433 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 AP3M1Q9Y2T2 418 aa13.03□□□□□ -0.32
NDEL1-204ENST00000578172 CPSF4LA6NMK7 179 aaKnown RBP13.02□□□□□ -0.32
NDEL1-204ENST00000578172 CLCA1A8K7I4 914 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 AP3D1O14617 1153 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 SLC16A6O15403 523 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 UGT2B17O75795 530 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 SULT1C4O75897 302 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 IFNA14P01570 189 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 CLEC2LP0C7M8 214 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 C1GALT1C1LP0DN25 315 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 SLC6A12P48065 614 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 C5orf22Q49AR2 442 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 KLHL12Q53G59 568 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 PSRC1Q6PGN9 363 aaPredicted RBP13.02□□□□□ -0.32
NDEL1-204ENST00000578172 CCDC149Q6ZUS6 474 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 TCEAL8Q8IYN2 117 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 DEPDC4Q8N2C3 294 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 PLA2G15Q8NCC3 412 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 CXorf40AQ8TE69 158 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 OVCA2Q8WZ82 227 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 ZSCAN5AQ9BUG6 496 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 IFT52Q9Y366 437 aa13.02□□□□□ -0.32
NDEL1-204ENST00000578172 ISM1B1AKI9 464 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 GMFGO60234 142 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 C6P13671 934 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 GPX2P18283 190 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 PTPN6P29350 595 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 GABARAPL2P60520 117 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 CD83Q01151 205 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 GSTM4Q03013 218 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 SF3B4Q15427 424 aaKnown RBP eCLIP13.02□□□□□ -0.33
NDEL1-204ENST00000578172 CRB2Q5IJ48 1285 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 CEP78Q5JTW2 689 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 TMEM31Q5JXX7 168 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 CALHM3Q86XJ0 350 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 PJA1Q8NG27 643 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 OR9A1PQ8NGU1 263 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.331e-12■■■■■ 31.6
NDEL1-204ENST00000578172 FCRL4Q96PJ5 515 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 TTYH2Q9BSA4 534 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 KLHL1Q9NR64 748 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 KLHL3Q9UH77 587 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 HCN4Q9Y3Q4 1203 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 TRBV5-4A0A0C4DH59 114 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 JRKO75564 520 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 NPPBP16860 134 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 JUNBP17275 347 aaPredicted RBP13.02□□□□□ -0.33
NDEL1-204ENST00000578172 IRS1P35568 1242 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 TEAD4Q15561 434 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 SDE2Q6IQ49 451 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 PARP16Q8N5Y8 322 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 L3MBTL4Q8NA19 623 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 OR10G6Q8NH81 332 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 TMED9Q9BVK6 235 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 TEX10Q9NXF1 929 aaPredicted RBP13.02□□□□□ -0.33
NDEL1-204ENST00000578172 CNIH4Q9P003 139 aa13.02□□□□□ -0.33
NDEL1-204ENST00000578172 AQP9O43315 295 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 ANXA8P13928 327 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 CHMP24386 653 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 NCBP2P52298 156 aaKnown RBP eCLIP13.01□□□□□ -0.33
NDEL1-204ENST00000578172 CLDN2P57739 230 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 CRTC2Q53ET0 693 aaPredicted RBP13.01□□□□□ -0.33
NDEL1-204ENST00000578172 SPIN4Q56A73 249 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 ZNF805Q5CZA5 627 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 C12orf40Q86WS4 652 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 AMER3Q8N944 861 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 VN1R2Q8NFZ6 395 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 OR8K5Q8NH50 307 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 POF1BQ8WVV4 589 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 GATAD2BQ8WXI9 593 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 NXPE3Q969Y0 559 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 REPS1Q96D71 796 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 DUSP21Q9H596 190 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 NDRG4Q9ULP0 352 aaKnown RBP13.01□□□□□ -0.33
NDEL1-204ENST00000578172 SLC9A8Q9Y2E8 581 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 PCDHGA3Q9Y5H0 932 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 TRBV5-3A0A0A0MS03 114 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 M0R082 166 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 FKTNO75072 461 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 CPNE3O75131 537 aaKnown RBP13.01□□□□□ -0.33
NDEL1-204ENST00000578172 SLC35G4P0C7Q5 338 aa13.01□□□□□ -0.33
NDEL1-204ENST00000578172 CCL5P13501 91 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms