RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 GPR50Q13585 617 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 ZNF544Q6NX49 715 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 BCDIN3DQ7Z5W3 292 aaKnown RBP18.17■□□□□ 0.5
SCARF1-206ENST00000573852 SLC46A2Q9BY10 475 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 NPAP1Q9NZP6 1156 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 TAAR2Q9P1P5 351 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 LAMA3Q16787 3333 aa18.17■□□□□ 0.5
SCARF1-206ENST00000573852 TRAV19A0A0A6YYK7 116 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 NEDD8-MDP1E9PL57 170 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 SNRPGP62308 76 aaKnown RBP18.16■□□□□ 0.5
SCARF1-206ENST00000573852 BAK1Q16611 211 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 ZNF284Q2VY69 593 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 REEP3Q6NUK4 255 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 LAX1Q8IWV1 398 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 WDR34Q96EX3 536 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 UCK2Q9BZX2 261 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 MTG2Q9H4K7 406 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 SNTG1Q9NSN8 517 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 DYRK1BQ9Y463 629 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 PLXND1Q9Y4D7 1925 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 OSMP13725 252 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 RPL3P39023 403 aaKnown RBP18.16■□□□□ 0.5
SCARF1-206ENST00000573852 SPHARQ15513 63 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 ZNF79Q15937 498 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 TECPR1Q7Z6L1 1165 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 KLHL6Q8WZ60 621 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 TMCO6Q96DC7 493 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 SLC6A18Q96N87 628 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 EFCAB11Q9BUY7 163 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 ASAH2Q9NR71 780 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 SPG21Q9NZD8 308 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 SEMA3DO95025 777 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 HBQ1P09105 142 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 AZGP1P25311 298 aaKnown RBP18.16■□□□□ 0.5
SCARF1-206ENST00000573852 RECQLP46063 649 aaPredicted RBP18.16■□□□□ 0.5
SCARF1-206ENST00000573852 KHDRBS1Q07666 443 aaKnown RBP eCLIP18.16■□□□□ 0.5
SCARF1-206ENST00000573852 TMEM215Q68D42 235 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 CEACAM20Q6UY09 585 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 KRT73Q86Y46 540 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 GATAD2AQ86YP4 633 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 GPR32P1Q8NGA4 272 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 SORCS1Q8WY21 1168 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 TMEM80Q96HE8 168 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 NOX1Q9Y5S8 564 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 SNX11Q9Y5W9 270 aa18.16■□□□□ 0.5
SCARF1-206ENST00000573852 IDH3BO43837 385 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 ADAP00813 363 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 ENDOUP21128 410 aaKnown RBP18.15■□□□□ 0.5
SCARF1-206ENST00000573852 ILKQ13418 452 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 TNFAIP8L2Q6P589 184 aaPredicted RBP18.15■□□□□ 0.5
SCARF1-206ENST00000573852 PAQR6Q6TCH4 344 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 ADIPOR2Q86V24 386 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 HORMAD2Q8N7B1 307 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 SLC38A5Q8WUX1 472 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 PDXPQ96GD0 296 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 ZNF558Q96NG5 402 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 SGPP1Q9BX95 441 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 COL4A6Q14031 1691 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 PQBP1O60828 265 aaKnown RBP18.15■□□□□ 0.5
SCARF1-206ENST00000573852 UGT2B17O75795 530 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 BCHEP06276 602 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 CTSLP07711 333 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 UQCRC2P22695 453 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 TMPRSS11AQ6ZMR5 421 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 RBM45Q8IUH3 476 aaKnown RBP18.15■□□□□ 0.5
SCARF1-206ENST00000573852 CFAP206Q8IYR0 622 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 SETD6Q8TBK2 473 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 CYB5D2Q8WUJ1 264 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 MTERF3Q96E29 417 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 TMCC3Q9ULS5 477 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 PCDHGB2Q9Y5G2 931 aa18.15■□□□□ 0.5
SCARF1-206ENST00000573852 LINC00854A0A1B0GVQ3 168 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 A8MV72 311 aaPredicted RBP18.14■□□□□ 0.49
SCARF1-206ENST00000573852 PSMA1P25786 263 aaKnown RBP18.14■□□□□ 0.49
SCARF1-206ENST00000573852 ELAVL4P26378 380 aaKnown RBP18.14■□□□□ 0.49
SCARF1-206ENST00000573852 RORCP51449 518 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 ZNF658BQ4V348 819 aaPredicted RBP18.14■□□□□ 0.49
SCARF1-206ENST00000573852 TMEM201Q5SNT2 666 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 HIST2H2AA3Q6FI13 130 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 TCTN3Q6NUS6 607 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 UNC5DQ6UXZ4 953 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 ZNF517Q6ZMY9 492 aaPredicted RBP18.14■□□□□ 0.49
SCARF1-206ENST00000573852 WFDC6Q9BQY6 131 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 NLNQ9BYT8 704 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 OR2B2Q9GZK3 357 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 MIEF1Q9NQG6 463 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 SEC14L4Q9UDX3 406 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 NDOR1Q9UHB4 597 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 OR10H3O60404 316 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 MFN2O95140 757 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 INHAP05111 366 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 TAP2Q03519 686 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 ZNF91Q05481 1191 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 NCF4Q15080 339 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 ARMC4Q5T2S8 1044 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 MEDAGQ5VYS4 303 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 C12orf73Q69YU5 71 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 NXPE4Q6UWF7 544 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 VN1R5Q7Z5H4 357 aa18.14■□□□□ 0.49
SCARF1-206ENST00000573852 CELF5Q8N6W0 485 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms