RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 DIRAS2Q96HU8 199 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 NEDD4LQ96PU5 975 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 SLC25A19Q9HC21 320 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 EXO1Q9UQ84 846 aaKnown RBP10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TRBV4-1A0A0J9YWV2 114 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 FABP12A6NFH5 140 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM202A6NGA9 273 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 MYL12AP19105 171 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 DGKGP49619 791 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 MXD1Q05195 221 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 RAB33AQ14088 237 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 LARS2Q15031 903 aaKnown RBP10.26□□□□□ -0.77
CCDC40-207ENST00000572253 CDK10Q15131 360 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 DDI2Q5TDH0 399 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 NXNL2Q5VZ03 156 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 DEF8Q6ZN54 512 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 USP30Q70CQ3 517 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 CHST14Q8NCH0 376 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 WDR48Q8TAF3 677 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 AP3S1Q92572 193 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TP53INP1Q96A56 240 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 ZFYVE19Q96K21 471 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM246Q9BRR3 403 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 RRAGCQ9HB90 399 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 PIPSLA2A3N6 862 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 ANKDD1BA6NHY2 528 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 A8MV72 311 aaPredicted RBP10.26□□□□□ -0.77
CCDC40-207ENST00000572253 SLC10A3P09131 477 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 ETV3P41162 512 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 QPRTQ15274 297 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM201Q5SNT2 666 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 ERAP2Q6P179 960 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 XKRXQ6PP77 449 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TMEM220Q6QAJ8 160 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TCEAL8Q8IYN2 117 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TCEANCQ8N8B7 351 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 GDPD1Q8N9F7 314 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 GRPEL2Q8TAA5 225 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 SRRQ9GZT4 340 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 NDUFB11Q9NX14 153 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 TBC1D14Q9P2M4 693 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 MUTYHQ9UIF7 546 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 KCND3Q9UK17 655 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 V9GYH0 126 aa10.26□□□□□ -0.77
CCDC40-207ENST00000572253 SNTNA6NMZ2 147 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 IL1AP01583 271 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 IL3P08700 152 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 BNC1Q01954 994 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF91Q05481 1191 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 FOXJ1Q92949 421 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 GLYATL1Q969I3 302 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 PPP1R16AQ96I34 528 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF607Q96SK3 696 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 VN1R3Q9BXE9 311 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 SEMA3GQ9NS98 782 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 CLEC2DQ9UHP7 191 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 SLC5A10A0PJK1 596 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 HOXC11O43248 304 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-207ENST00000572253 ARHGEF9O43307 516 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 CYP17A1P05093 508 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 BCHEP06276 602 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 NR2F6P10588 404 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 NNMTP40261 264 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 PRLHRP49683 370 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 CTSCP53634 463 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 ASAH1Q13510 395 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 LEXMQ3ZCV2 418 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 PYDC2Q56P42 97 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 LIPKQ5VXJ0 399 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 TNFAIP8L2Q6P589 184 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-207ENST00000572253 VWA5B2Q8N398 1253 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 NATD1Q8N6N6 113 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 NANOGP1Q8N7R0 232 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCDC40-207ENST00000572253 ZNF480Q8WV37 535 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 SLC5A11Q8WWX8 675 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 ST6GAL2Q96JF0 529 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 FZD3Q9NPG1 666 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 TVP23BQ9NYZ1 205 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 LSM2Q9Y333 95 aaKnown RBP10.25□□□□□ -0.77
CCDC40-207ENST00000572253 IRGMA1A4Y4 181 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 SLC35F4A4IF30 521 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 TNNI3P19429 210 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 FEN1P39748 380 aaKnown RBP10.25□□□□□ -0.77
CCDC40-207ENST00000572253 CRYBB2P43320 205 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 WDR5P61964 334 aaKnown RBP10.25□□□□□ -0.77
CCDC40-207ENST00000572253 SLC7A9P82251 487 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 DUSP7Q16829 419 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 LAPTM4BQ86VI4 370 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 CLDN22Q8N7P3 220 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 PDXPQ96GD0 296 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 KCTD7Q96MP8 289 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 BARHL1Q9BZE3 327 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 SLA2Q9H6Q3 261 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 ANKRA2Q9H9E1 313 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 IL21Q9HBE4 155 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 GSTK1Q9Y2Q3 226 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 PCNTO95613 3336 aa10.25□□□□□ -0.77
CCDC40-207ENST00000572253 FAM227AF5H4B4 570 aa10.24□□□□□ -0.77
CCDC40-207ENST00000572253 RAB36O95755 333 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms