RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 EDEM2Q9BV94 578 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 TRIM8Q9BZR9 551 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 KCNH6Q9H252 994 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 REEP4Q9H6H4 257 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 COPS7BQ9H9Q2 264 aaPredicted RBP9.47□□□□□ -0.89
GDE1-205ENST00000569899 PDE7BQ9NP56 450 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 SLAMF8Q9P0V8 285 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 PACSIN3Q9UKS6 424 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 NEUROG3Q9Y4Z2 214 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.47□□□□□ -0.89
GDE1-205ENST00000569899 OTOGLQ3ZCN5 2332 aa9.47□□□□□ -0.89
GDE1-205ENST00000569899 NUP210LQ5VU65 1888 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 ZNF860A6NHJ4 632 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 GABRR3A8MPY1 467 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 CDX4O14627 284 aaPredicted RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 FLRT2O43155 660 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 PDE5AO76074 875 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 SCELO95171 688 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 MED26O95402 600 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 ZNF806P0C7X5 589 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 SMIM10L1P0DMW3 83 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 LAMP1P11279 417 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 IL1RNP18510 177 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 PGM1P36871 562 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 WNT3P56703 355 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 BTN3A2P78410 334 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 TGM3Q08188 693 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 PDE7AQ13946 482 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 PRSS53Q2L4Q9 553 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 INAVAQ3KP66 663 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 DEFB134Q4QY38 66 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 ZC3H12BQ5HYM0 836 aaKnown RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 WASHC2DQ5SRD0 308 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 C6orf10Q5SRN2 563 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 MRM1Q6IN84 353 aaKnown RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 C8orf82Q6P1X6 216 aaPredicted RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 HACD2Q6Y1H2 254 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 BNC2Q6ZN30 1099 aaPredicted RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 IKBIPQ70UQ0 350 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 CAMKMTQ7Z624 323 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 GPR180Q86V85 440 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 ZCCHC7Q8N3Z6 543 aaKnown RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 ZNF655Q8N720 491 aaPredicted RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 SRFBP1Q8NEF9 429 aaKnown RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 ROPN1LQ96C74 230 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 SMIM10Q96HG1 83 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 CNDP2Q96KP4 475 aaKnown RBP9.46□□□□□ -0.89
GDE1-205ENST00000569899 TBCDQ9BTW9 1192 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 DUSP26Q9BV47 211 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 LRRN3Q9H3W5 708 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 C5AR2Q9P296 337 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 ATP6V1HQ9UI12 483 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 PCDHGB2Q9Y5G2 931 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 PCDHGA7Q9Y5G6 932 aa9.46□□□□□ -0.89
GDE1-205ENST00000569899 A0A088AWK7 358 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 URADA6NGE7 173 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 A8MUI8 341 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 ZSCAN9O15535 394 aaPredicted RBP9.45□□□□□ -0.9
GDE1-205ENST00000569899 SORBS2O94875 1100 aaKnown RBP9.45□□□□□ -0.9
GDE1-205ENST00000569899 CPNE6O95741 557 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 FAM58BPP0C7Q3 252 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 ALOX12P18054 663 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 NME2P22392 152 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 CDKN2CP42773 168 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 TSFMP43897 325 aaKnown RBP9.45□□□□□ -0.9
GDE1-205ENST00000569899 ALDH9A1P49189 494 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 ARFIP1P53367 373 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 MTTPP55157 894 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 PSME3P61289 254 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 OLR1P78380 273 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 SLAMF1Q13291 335 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 GPR19Q15760 415 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 MAPKAPK3Q16644 382 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 MPEG1Q2M385 716 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 PRTGQ2VWP7 1150 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 GTDC1Q4AE62 458 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 CPTPQ5TA50 214 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 FAM180BQ6P0A1 224 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 TMEM71Q6P5X7 295 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 ZNF574Q6ZN55 896 aaPredicted RBP9.45□□□□□ -0.9
GDE1-205ENST00000569899 DBX2Q6ZNG2 339 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 ABHD13Q7L211 337 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 CD163Q86VB7 1156 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 PDSS2Q86YH6 399 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 TICAM1Q8IUC6 712 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 ULK2Q8IYT8 1036 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 CLECL1Q8IZS7 167 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 SHISA5Q8N114 240 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 CARFQ8N187 725 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 ARHGEF39Q8N4T4 335 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 DPP10Q8N608 796 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 OR8J2Q8NGG1 315 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 KLHL6Q8WZ60 621 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 GTF2H4Q92759 462 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 UCN3Q969E3 161 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 CIDECQ96AQ7 238 aaPredicted RBP9.45□□□□□ -0.9
GDE1-205ENST00000569899 PPCDCQ96CD2 204 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 LRRC58Q96CX6 371 aa9.45□□□□□ -0.9
GDE1-205ENST00000569899 SLC41A2Q96JW4 573 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms