RNA–Protein interactions for RNA: ENST00000569144.5

CDH13-212, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-212ENST00000569144 HCN1O60741 890 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 RDH16O75452 317 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ITGA10O75578 1167 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 STATHP02808 62 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 PLA2G1BP04054 148 aaKnown RBP5.42□□□□□ -1.54
CDH13-212ENST00000569144 H2AFZP0C0S5 128 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 FAM228BP0C875 321 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 PSMB4P28070 264 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 RPA3P35244 121 aaPredicted RBP5.42□□□□□ -1.54
CDH13-212ENST00000569144 TIMP3P35625 211 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 CDKN2BP42772 138 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 SSR4P51571 173 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 CLCN2P51788 898 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ABATP80404 500 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 RUNX1T1Q06455 604 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 TRIM14Q14142 442 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ACKR1Q16570 336 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 HYAL4Q2M3T9 481 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 VMACQ2NL98 169 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 TYSND1Q2T9J0 566 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 KRTAP19-4Q3LI73 84 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 KRTAP24-1Q3LI83 254 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 CCDC38Q502W7 563 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ICE2Q659A1 982 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 SUSD1Q6UWL2 747 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 CD300LDQ6UXZ3 194 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 H2AFVQ71UI9 128 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 VN1R4Q7Z5H5 301 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ADCK2Q7Z695 626 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 PDSS2Q86YH6 399 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ULK2Q8IYT8 1036 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 NFAM1Q8NET5 270 aaPredicted RBP5.42□□□□□ -1.54
CDH13-212ENST00000569144 TNIP2Q8NFZ5 429 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 PPP1R14CQ8TAE6 165 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 GSDMBQ8TAX9 411 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 PHOSPHO1Q8TCT1 267 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 LRRC45Q96CN5 670 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 FOPNLQ96NB1 174 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 PPP1R2P1Q96PQ5 205 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ALS2CR12Q96Q35 445 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 CCL19Q99731 98 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 EBNA1BP2Q99848 306 aaKnown RBP5.42□□□□□ -1.54
CDH13-212ENST00000569144 FAM173AQ9BQD7 235 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 LDAHQ9H6V9 325 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 IL1RL2Q9HB29 575 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ANKHQ9HCJ1 492 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 DDX56Q9NY93 547 aaKnown RBP5.42□□□□□ -1.54
CDH13-212ENST00000569144 TAC3Q9UHF0 121 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 ERVK-11Q9UQG0 969 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 EIF3LQ9Y262 564 aaKnown RBP5.42□□□□□ -1.54
CDH13-212ENST00000569144 DRG1Q9Y295 367 aaKnown RBP5.42□□□□□ -1.54
CDH13-212ENST00000569144 PCDHA9Q9Y5H5 950 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 PMF1-BGLAPU3KQ54 211 aa5.42□□□□□ -1.54
CDH13-212ENST00000569144 KCNE1BA0A087WTH5 132 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 TRGV5A0A0B4J1U4 118 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 A0A0G2JMM0 328 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 TRBV11-1A0A0K0K1C0 115 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 ATP6AP2A0A1C7CYW4 349 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 A0A1W2PPB8 328 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 A0A1W2PRS3 328 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 TCRBV16S1A1N1A0A5B0 115 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 CCDC162PA2VCL2 907 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 SH3D21A4FU49 640 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 MROH6A6NGR9 719 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 A8MVJ9 347 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 KIR3DP1A8MWS1 328 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 ATP6AP2O75787 350 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 SIX3O95343 332 aaPredicted RBP5.41□□□□□ -1.54
CDH13-212ENST00000569144 EPPINO95925 133 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 SERPING1P05155 500 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 FHP07954 510 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 PAX1P15863 534 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 TPH1P17752 444 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 CNR1P21554 472 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 JAK1P23458 1154 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 RBL1P28749 1068 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 CYLC1P35663 651 aaPredicted RBP5.41□□□□□ -1.54
CDH13-212ENST00000569144 HSD17B2P37059 387 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 PPARGP37231 505 aaPredicted RBP5.41□□□□□ -1.54
CDH13-212ENST00000569144 PTH2RP49190 550 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 ZNF136P52737 540 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 CAPRIN1Q14444 709 aaKnown RBP5.41□□□□□ -1.54
CDH13-212ENST00000569144 SPARCL1Q14515 664 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 POU6F1Q14863 301 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 SLC10A1Q14973 349 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 ARHGAP19Q14CB8 494 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 CHRFAM7AQ494W8 412 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 ANKRD20A4Q4UJ75 823 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 ANKRD20A2Q5SQ80 823 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 ANKRD20A1Q5TYW2 823 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 ANKRD20A3Q5VUR7 823 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 AFTPHQ6ULP2 937 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 QSOX2Q6ZRP7 698 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 PLD3Q8IV08 490 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 LACC1Q8IV20 430 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 KLHDC8BQ8IXV7 354 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 KRT222Q8N1A0 295 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 APCDD1LQ8NCL9 501 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 B3GNT7Q8NFL0 401 aa5.41□□□□□ -1.54
CDH13-212ENST00000569144 OR9A1PQ8NGU1 263 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms