RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 JKAMPQ9P055 326 aa5.28□□□□□ -1.56
CDH13-211ENST00000568770 RSPH14Q9UHP6 348 aa5.28□□□□□ -1.56
CDH13-211ENST00000568770 BZW2Q9Y6E2 419 aaKnown RBP5.28□□□□□ -1.56
CDH13-211ENST00000568770 PRSS21Q9Y6M0 314 aa5.28□□□□□ -1.56
CDH13-211ENST00000568770 IGHV3-20A0A0C4DH32 117 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 TRBV5-4A0A0C4DH59 114 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 TARM1B6A8C7 271 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 RASGRF2O14827 1237 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 PROM1O43490 865 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 CTAG2O75638 210 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 HAUS5O94927 633 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 AP2A2O94973 939 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 FTH1P02794 183 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 SERPING1P05155 500 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 TPOP07202 933 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 C8orf89P0DMQ9 161 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 ZNF24P17028 368 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 GCSHP23434 173 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 MGAT1P26572 445 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 PSMB5P28074 263 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 PTGER1P34995 402 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 ADRA1AP35348 466 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 PTGS2P35354 604 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 SLC26A3P40879 764 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 GEMP55040 296 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 SYT16Q17RD7 645 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 BTBD16Q32M84 506 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 NRN1LQ496H8 165 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 SYTL3Q4VX76 610 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 DNAJC21Q5F1R6 531 aaKnown RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 H3F3CQ6NXT2 135 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 ALKBH5Q6P6C2 394 aaKnown RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 GALNTL5Q7Z4T8 443 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 BIVMQ86UB2 503 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 CRLF3Q8IUI8 442 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 TMTC1Q8IUR5 882 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 CPSF7Q8N684 471 aaKnown RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 FITM2Q8N6M3 262 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 AMER3Q8N944 861 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 TMEM178AQ8NBL3 297 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 FAM98AQ8NCA5 519 aaKnown RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 FAM156AQ8NDB6 213 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 OR2L8Q8NGY9 312 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 CFAP61Q8NHU2 1237 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 FAM57AQ8TBR7 257 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 ASB5Q8WWX0 329 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 HAUS1Q96CS2 278 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 MMABQ96EY8 250 aaPredicted RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 RMND5BQ96G75 393 aaPredicted RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 DNAJC1Q96KC8 554 aaKnown RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 ZNF354BQ96LW1 612 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 VAT1Q99536 393 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 NPAS2Q99743 824 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 UTP23Q9BRU9 249 aaKnown RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 PACSIN1Q9BY11 444 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 POLDIP3Q9BY77 421 aaKnown RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 ZNF703Q9H7S9 590 aaPredicted RBP5.27□□□□□ -1.57
CDH13-211ENST00000568770 C14orf105Q9NVL8 296 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 SMARCAL1Q9NZC9 954 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 CHMP5Q9NZZ3 219 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 UVRAGQ9P2Y5 699 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 LCMT1Q9UIC8 334 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 CDC14AQ9UNH5 594 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 RNF6Q9Y252 685 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 PLEKHA6Q9Y2H5 1048 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 FAM169AQ9Y6X4 670 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 NCKAP5O14513 1909 aa5.27□□□□□ -1.57
CDH13-211ENST00000568770 FREM3P0C091 2139 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 A0A1B0GTH9 108 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 FAM237BA0A1B0GVD1 139 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 H0YGG7 62 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 H7C0S8 307 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 PRPF4O43172 522 aaKnown RBP eCLIP5.26□□□□□ -1.57
CDH13-211ENST00000568770 KLK8O60259 260 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 CST8O60676 142 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 ANXA9O76027 345 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 NEURL1O76050 574 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 RPN2P04844 631 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 SP1P08047 785 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 ANXA5P08758 320 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 OR56A5P0C7T3 313 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 ERVK-10P10266 1014 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 TNNT1P13805 278 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 DNASE1P24855 282 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 CDKN2BP42772 138 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 PIK3CGP48736 1102 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 DGKQP52824 942 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 ARF3P61204 181 aaPredicted RBP5.26□□□□□ -1.57
CDH13-211ENST00000568770 OC90Q02509 493 aaPredicted RBP5.26□□□□□ -1.57
CDH13-211ENST00000568770 PLOD1Q02809 727 aaPredicted RBP5.26□□□□□ -1.57
CDH13-211ENST00000568770 PMPCAQ10713 525 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 STX1AQ16623 288 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 MAPKAPK3Q16644 382 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 MEP1AQ16819 746 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 HKDC1Q2TB90 917 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 PRTGQ2VWP7 1150 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 ODF2Q5BJF6 829 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 MFSD4BQ5TF39 518 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 KAZNQ674X7 775 aa5.26□□□□□ -1.57
CDH13-211ENST00000568770 PLAG1Q6DJT9 500 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms