RNA–Protein interactions for RNA: ENST00000565309.1

TRAPPC2L-210, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 3

Gene TRAPPC2L, Length 699 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-210ENST00000565309 LINC00032P0C843 101 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 GRK2P25098 689 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ITGA3P26006 1051 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ABCE1P61221 599 aaKnown RBP12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ID2Q02363 134 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ACSM2AQ08AH3 577 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 STX3Q13277 289 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 UGT3A2Q3SY77 523 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 SPIN4Q56A73 249 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ACSM2BQ68CK6 577 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 PAPD4Q6PIY7 484 aaKnown RBP12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 AMER2Q8N7J2 671 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 FDCSPQ8NFU4 85 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 TANKQ92844 425 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 IMMP1LQ96LU5 166 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 WDR77Q9BQA1 342 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 TUBB6Q9BUF5 446 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 SLC25A23Q9BV35 468 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 TUBB1Q9H4B7 451 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 PNO1Q9NRX1 252 aaKnown RBP12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 TEX10Q9NXF1 929 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 CLDN16Q9Y5I7 305 aa12.29□□□□□ -0.44
TRAPPC2L-210ENST00000565309 GLOD5A6NK44 160 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 WASHC1A8K0Z3 465 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 A8MUA0 341 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 HMGB1P1B2RPK0 211 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 SLC28A1O00337 649 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 AIFM1O95831 613 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 CELA2AP08217 269 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 PRR35P0CG20 571 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 NR2F6P10588 404 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 SFTPCP11686 197 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ICAM2P13598 275 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 PPP2R1BP30154 601 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 SLC1A6P48664 564 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 SOX8P57073 446 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 RAE1P78406 368 aaKnown RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 STX4Q12846 297 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 MYBPC3Q14896 1274 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 BTBD16Q32M84 506 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 NDUFAF5Q5TEU4 345 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 OR4N5Q8IXE1 308 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 DDIASQ8IXT1 998 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 KBTBD2Q8IY47 623 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 LSM14AQ8ND56 463 aaKnown RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 C9orf43Q8TAL5 461 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 TWIST2Q8WVJ9 160 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 SLC39A7Q92504 469 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 UCN3Q969E3 161 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ANKRD9Q96BM1 317 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 TM4SF18Q96CE8 201 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 THOC3Q96J01 351 aaKnown RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 LPAR4Q99677 370 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 NUDT9Q9BW91 350 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ALOXE3Q9BYJ1 711 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 SEMA4CQ9C0C4 833 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 C20orf27Q9GZN8 174 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 WDR41Q9HAD4 459 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 ZNF71Q9NQZ8 489 aaPredicted RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 GPR83Q9NYM4 423 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 MCM8Q9UJA3 840 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 G3BP2Q9UN86 482 aaKnown RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 CCL27Q9Y4X3 112 aa12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 PCDHGA9Q9Y5G4 932 aaKnown RBP12.28□□□□□ -0.44
TRAPPC2L-210ENST00000565309 PRRC2CQ9Y520 2896 aaKnown RBP12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 GNG14A0A1W2PPG7 69 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 K7EM74 188 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 PIP5K1BO14986 540 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 PGRMC2O15173 223 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 RGS14O43566 566 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 PCDH7O60245 1069 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 FGF17O60258 216 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 GUCY1B2O75343 617 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 SEC22BO75396 215 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 RSL1D1O76021 490 aaKnown RBP12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 IFNA16P05015 189 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 SERPINA7P05543 415 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 NR1D1P20393 614 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 FOLH1Q04609 750 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 BST1Q10588 318 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 EXT1Q16394 746 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 SOWAHCQ53LP3 525 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 IRAK1BP1Q5VVH5 260 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 PLAG1Q6DJT9 500 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 TCTN3Q6NUS6 607 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 GALNT18Q6P9A2 607 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 RIPOR1Q6ZS17 1223 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 RNF165Q6ZSG1 346 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 Q6ZSR9 355 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 HOMEZQ8IX15 550 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 ZNF781Q8N8C0 355 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 OR2T11Q8NH01 316 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 C11orf24Q96F05 449 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 SORT1Q99523 831 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 LHPPQ9H008 270 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 ILKAPQ9H0C8 392 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 SLC25A18Q9H1K4 315 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 ACBD3Q9H3P7 528 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 TP53TG5Q9Y2B4 290 aa12.27□□□□□ -0.45
TRAPPC2L-210ENST00000565309 DOCK10Q96BY6 2186 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms