RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 MYOCOSA0A1B0GUC4 107 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 ATP6AP2A0A1C7CYW4 349 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 NCF1BA6NI72 391 aaPredicted RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 NCF1CA8MVU1 366 aaPredicted RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 CLGNO14967 610 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 HCN1O60741 890 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 LDB3O75112 727 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 ATP6AP2O75787 350 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 NCF1P14598 390 aaPredicted RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 GABRA1P14867 456 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 TNNI3P19429 210 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 ENDOUP21128 410 aaKnown RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 GGT5P36269 586 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 PEX19P40855 299 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 SLC10A1Q14973 349 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 MPEG1Q2M385 716 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 RIPPLY2Q5TAB7 128 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 WDR53Q7Z5U6 358 aaPredicted RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 WDR34Q96EX3 536 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 PTCD3Q96EY7 689 aaKnown RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 VPS39Q96JC1 886 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 PWWP2AQ96N64 755 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 POLDIP3Q9BY77 421 aaKnown RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 ROGDIQ9GZN7 287 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 DERL2Q9GZP9 239 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 LDAHQ9H6V9 325 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 ZNF703Q9H7S9 590 aaPredicted RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 CNOT10Q9H9A5 744 aaKnown RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 CCM2LQ9NUG4 571 aaPredicted RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 DNAJC11Q9NVH1 559 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 ZNF358Q9NW07 568 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 WWOXQ9NZC7 414 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 ST6GALNAC2Q9UJ37 374 aa13.02□□□□□ -0.33
CDR2-204ENST00000564542 ZNF490Q9ULM2 529 aaPredicted RBP13.02□□□□□ -0.33
CDR2-204ENST00000564542 PRRC2AP48634 2157 aaKnown RBP13.01□□□□□ -0.33
CDR2-204ENST00000564542 TRGV5A0A0B4J1U4 118 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 CES2O00748 559 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 TAPBPO15533 448 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 PRAMEF4O60810 478 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 ETHE1O95571 254 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 HOXB4P17483 251 aaPredicted RBP13.01□□□□□ -0.33
CDR2-204ENST00000564542 PPP2R2AP63151 447 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 PRAMEF9Q5VWM5 478 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 ZNF793Q6ZN11 406 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 SRFBP1Q8NEF9 429 aaKnown RBP13.01□□□□□ -0.33
CDR2-204ENST00000564542 C7orf57Q8NEG2 295 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 NUBPLQ8TB37 319 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 RMND5BQ96G75 393 aaPredicted RBP13.01□□□□□ -0.33
CDR2-204ENST00000564542 CAPZA3Q96KX2 299 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 RUNDC3BQ96NL0 473 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 F2RL3Q96RI0 385 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 EFCAB11Q9BUY7 163 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 CNPPD1Q9BV87 410 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 CLEC4MQ9H2X3 399 aaPredicted RBP13.01□□□□□ -0.33
CDR2-204ENST00000564542 RHOJQ9H4E5 214 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 EXO5Q9H790 373 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 SH2D2AQ9NP31 389 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 SEMA4BQ9NPR2 832 aaPredicted RBP13.01□□□□□ -0.33
CDR2-204ENST00000564542 NSMCE4AQ9NXX6 385 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 SPRR3Q9UBC9 169 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 PCDHGB3Q9Y5G1 929 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.01□□□□□ -0.33
CDR2-204ENST00000564542 SPACA6W5XKT8 324 aa13.01□□□□□ -0.33
CDR2-204ENST00000564542 ARHGAP21Q5T5U3 1957 aa13□□□□□ -0.33
CDR2-204ENST00000564542 SCELO95171 688 aa13□□□□□ -0.33
CDR2-204ENST00000564542 WISP3O95389 354 aaPredicted RBP13□□□□□ -0.33
CDR2-204ENST00000564542 COX7A2P14406 83 aa13□□□□□ -0.33
CDR2-204ENST00000564542 KLK2P20151 261 aa13□□□□□ -0.33
CDR2-204ENST00000564542 CD22P20273 847 aa13□□□□□ -0.33
CDR2-204ENST00000564542 PIGAP37287 484 aa13□□□□□ -0.33
CDR2-204ENST00000564542 KIR2DL3P43628 341 aa13□□□□□ -0.33
CDR2-204ENST00000564542 ARL4CP56559 192 aa13□□□□□ -0.33
CDR2-204ENST00000564542 IGLV3-21P80748 117 aaPredicted RBP13□□□□□ -0.33
CDR2-204ENST00000564542 TBL3Q12788 808 aaKnown RBP13□□□□□ -0.33
CDR2-204ENST00000564542 ASPHQ12797 758 aa13□□□□□ -0.33
CDR2-204ENST00000564542 ILF2Q12905 390 aaKnown RBP13□□□□□ -0.33
CDR2-204ENST00000564542 LAPTM5Q13571 262 aa13□□□□□ -0.33
CDR2-204ENST00000564542 DOC2AQ14183 400 aa13□□□□□ -0.33
CDR2-204ENST00000564542 CEBPEQ15744 281 aa13□□□□□ -0.33
CDR2-204ENST00000564542 PDK4Q16654 411 aa13□□□□□ -0.33
CDR2-204ENST00000564542 ZNF791Q3KP31 576 aaPredicted RBP13□□□□□ -0.33
CDR2-204ENST00000564542 PIGGQ5H8A4 983 aa13□□□□□ -0.33
CDR2-204ENST00000564542 PAGE2BQ5JRK9 111 aa13□□□□□ -0.33
CDR2-204ENST00000564542 CDKL4Q5MAI5 379 aa13□□□□□ -0.33
CDR2-204ENST00000564542 SLC22A10Q63ZE4 541 aa13□□□□□ -0.33
CDR2-204ENST00000564542 ADGRD1Q6QNK2 874 aa13□□□□□ -0.33
CDR2-204ENST00000564542 UBE3DQ7Z6J8 389 aa13□□□□□ -0.33
CDR2-204ENST00000564542 ANKMY2Q8IV38 441 aa13□□□□□ -0.33
CDR2-204ENST00000564542 FBXW8Q8N3Y1 598 aa13□□□□□ -0.33
CDR2-204ENST00000564542 ACOT4Q8N9L9 421 aa13□□□□□ -0.33
CDR2-204ENST00000564542 SNX31Q8N9S9 440 aa13□□□□□ -0.33
CDR2-204ENST00000564542 SLC22A8Q8TCC7 542 aa13□□□□□ -0.33
CDR2-204ENST00000564542 PAQR8Q8TEZ7 354 aa13□□□□□ -0.33
CDR2-204ENST00000564542 ANKRD9Q96BM1 317 aaPredicted RBP13□□□□□ -0.33
CDR2-204ENST00000564542 SPACA9Q96E40 222 aaPredicted RBP13□□□□□ -0.33
CDR2-204ENST00000564542 MAPKAP1Q9BPZ7 522 aa13□□□□□ -0.33
CDR2-204ENST00000564542 GPATCH1Q9BRR8 931 aaKnown RBP13□□□□□ -0.33
CDR2-204ENST00000564542 MCMBPQ9BTE3 642 aa13□□□□□ -0.33
CDR2-204ENST00000564542 TBCDQ9BTW9 1192 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms