RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 GALNT6Q8NCL4 622 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 FAM156AQ8NDB6 213 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 HIPK4Q8NE63 616 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 CATSPER1Q8NEC5 780 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 OR52E4Q8NGH9 312 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 OR4A15Q8NGL6 344 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 EDARADDQ8WWZ3 215 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PYDC1Q8WXC3 89 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 OR5P2Q8WZ92 322 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 TM4SF18Q96CE8 201 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 TCTN2Q96GX1 697 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 AHCYL2Q96HN2 611 aaKnown RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 REXO5Q96IC2 774 aaKnown RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 SERINC2Q96SA4 455 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PCDHAC1Q9H158 963 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 KAT8Q9H7Z6 458 aaKnown RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 YY1AP1Q9H869 796 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 LHX9Q9NQ69 397 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PRDM7Q9NQW5 492 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 ACSS1Q9NUB1 689 aaPredicted RBP9.2□□□□□ -0.94
UBFD1-202ENST00000563366 GIMAP4Q9NUV9 329 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 SLC25A37Q9NYZ2 338 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 NLGN3Q9NZ94 848 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 PACSIN3Q9UKS6 424 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 CACNA1IQ9P0X4 2223 aa9.2□□□□□ -0.94
UBFD1-202ENST00000563366 CACNA1EQ15878 2313 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 A0A0J9YVX5 310 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 DHRS12A0PJE2 317 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 RTCAO00442 366 aaKnown RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 HNRNPRO43390 633 aaKnown RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 B3GALT2O43825 422 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 SDC3O75056 442 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 CPSF4O95639 269 aaKnown RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 CER1O95813 267 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 PNLIPP16233 465 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 TYRP1P17643 537 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 GPX2P18283 190 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 GGT1P19440 569 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 IL10P22301 178 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 EPHA8P29322 1005 aaPredicted RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 TLX1P31314 330 aaPredicted RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 MSX2P35548 267 aaPredicted RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 FRKP42685 505 aaPredicted RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 PTDSS1P48651 473 aaKnown RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 ALDH9A1P49189 494 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 POLE2P56282 527 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 SESN3P58005 492 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 SLAMF1Q13291 335 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 NR1D2Q14995 579 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 NDUFA9Q16795 377 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 NDUFAF5Q5TEU4 345 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 MRM1Q6IN84 353 aaKnown RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 IRGCQ6NXR0 463 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 FBXO42Q6P3S6 717 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 BHLHB9Q6PI77 547 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 C1orf229Q6ZS94 237 aaPredicted RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 UBE3DQ7Z6J8 389 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 PLXDC1Q8IUK5 500 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 SLC30A8Q8IWU4 369 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 FAM20CQ8IXL6 584 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 MSRB3Q8IXL7 192 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 MICU2Q8IYU8 434 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 PQLC1Q8N2U9 271 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 OR10A6Q8NH74 314 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 TTC9Q92623 222 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 NSMCE2Q96MF7 247 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 ZNF583Q96ND8 569 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 TEFMQ96QE5 360 aaKnown RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 INPP5KQ9BT40 448 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 VCXQ9H320 206 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 GORASP2Q9H8Y8 452 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 TPT1P8Q9HAU6 139 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 ARMC1Q9NVT9 282 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 LRIT1Q9P2V4 623 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 EXO1Q9UQ84 846 aaKnown RBP9.19□□□□□ -0.94
UBFD1-202ENST00000563366 ENTPD4Q9Y227 616 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 KLHL20Q9Y2M5 609 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 NEUROG3Q9Y4Z2 214 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 AP4S1Q9Y587 144 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 SNX11Q9Y5W9 270 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 SLC22A7Q9Y694 548 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 TECTAO75443 2155 aa9.19□□□□□ -0.94
UBFD1-202ENST00000563366 A0A1B0GTQ1 180 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 BLACEA4D250 179 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 H0YGG7 62 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 OIP5O43482 229 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 TMPRSS11DO60235 418 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 CTSVO60911 334 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 ZBTB11O95625 1053 aaPredicted RBP9.18□□□□□ -0.94
UBFD1-202ENST00000563366 BAG2O95816 211 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 GSNP06396 782 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 RETP07949 1114 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 ZNF888P0CJ79 500 aaPredicted RBP9.18□□□□□ -0.94
UBFD1-202ENST00000563366 SMIM10L1P0DMW3 83 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 NR2F6P10588 404 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 COL6A3P12111 3177 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 ALOX12P18054 663 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 UQCRC2P22695 453 aa9.18□□□□□ -0.94
UBFD1-202ENST00000563366 CHI3L1P36222 383 aaPredicted RBP9.18□□□□□ -0.94
UBFD1-202ENST00000563366 CDKN2CP42773 168 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms