RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 A8MUI8 341 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CDK2AP1O14519 115 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 PROM1O43490 865 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 TMPRSS11DO60235 418 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 LDB3O75112 727 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 SPAG7O75391 227 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 EEDO75530 441 aaKnown RBP11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CRCPO75575 148 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 MYO1DO94832 1006 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 SORBS2O94875 1100 aaKnown RBP11.68□□□□□ -0.54
SLIRP-209ENST00000557342 IFNA16P05015 189 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 KLK1P06870 262 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 MYZAPP0CAP1 466 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 NR2F6P10588 404 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CD97P48960 835 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CLCN2P51788 898 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 HNRNPH2P55795 449 aaKnown RBP11.68□□□□□ -0.54
SLIRP-209ENST00000557342 PCLAFQ15004 111 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 TLR1Q15399 786 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CEP85LQ5SZL2 805 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CCNYL2Q5T2Q4 361 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 B3GNTL1Q67FW5 361 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-209ENST00000557342 LRIG3Q6UXM1 1119 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 C10orf107Q8IVU9 208 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 IQCKQ8N0W5 287 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 LGI4Q8N135 537 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 NFAM1Q8NET5 270 aaPredicted RBP11.68□□□□□ -0.54
SLIRP-209ENST00000557342 TCP10LQ8TDR4 215 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 HAS2Q92819 552 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 DAZLQ92904 295 aaKnown RBP11.68□□□□□ -0.54
SLIRP-209ENST00000557342 VMP1Q96GC9 406 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CNDP1Q96KN2 507 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 ZIM3Q96PE6 472 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 TRMOQ9BU70 441 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 MRPL1Q9BYD6 325 aaKnown RBP11.68□□□□□ -0.54
SLIRP-209ENST00000557342 STMN3Q9NZ72 180 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 ATG4BQ9Y4P1 393 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 ASB4Q9Y574 426 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CLDN16Q9Y5I7 305 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CLCA3PQ9Y6N3 262 aa11.68□□□□□ -0.54
SLIRP-209ENST00000557342 CROCCQ5TZA2 2017 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 TGFBR3LH3BV60 316 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 DYRK3O43781 588 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 COX7A2P14406 83 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 TNNI3P19429 210 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 ALDH3A1P30838 453 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 MAPK12P53778 367 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 IGLV3-21P80748 117 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 ZNF169Q14929 603 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 PLEKHN1Q494U1 663 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 COLEC12Q5KU26 742 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 TCHHL1Q5QJ38 904 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 ACER2Q5QJU3 275 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 C18orf63Q68DL7 685 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 COMMD6Q7Z4G1 85 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 MORN4Q8NDC4 146 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 OR14A16Q8NHC5 309 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 SUN3Q8TAQ9 357 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 CPT1CQ8TCG5 803 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 ANKRD9Q96BM1 317 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 DGAT2Q96PD7 388 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 PELOQ9BRX2 385 aaKnown RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 STMN4Q9H169 189 aaPredicted RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 SSU72Q9NP77 194 aaKnown RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 SLC17A7Q9P2U7 560 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 PPIEQ9UNP9 301 aaKnown RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 TIMM22Q9Y584 194 aa11.67□□□□□ -0.54
SLIRP-209ENST00000557342 TLN1Q9Y490 2541 aaKnown RBP11.67□□□□□ -0.54
SLIRP-209ENST00000557342 TRAV17A0A0B4J275 112 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 A0A1W2PR48 441 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 OR5H15A6NDH6 313 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 UBFD1O14562 309 aaKnown RBP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 TYROBPO43914 113 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 FGF17O60258 216 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 NPHS1O60500 1241 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 AIFM1O95831 613 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 WDPCPO95876 746 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 GBAP04062 536 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 UROSP10746 265 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 TPP2P29144 1249 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 STT3AP46977 705 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 MLLT10P55197 1068 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 TRA2BP62995 288 aaKnown RBP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 PLIN5Q00G26 463 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 FOLH1Q04609 750 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 GALNT1Q10472 559 aaPredicted RBP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 TBL3Q12788 808 aaKnown RBP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 SPIN4Q56A73 249 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 OR52E8Q6IFG1 317 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 CUZD1Q86UP6 607 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 RPS19BP1Q86WX3 136 aaKnown RBP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 CRLF3Q8IUI8 442 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 Q8NA96 180 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 APCDD1LQ8NCL9 501 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 CHTF18Q8WVB6 975 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 PGM2Q96G03 612 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 RBM18Q96H35 190 aaKnown RBP11.66□□□□□ -0.54
SLIRP-209ENST00000557342 KCNA7Q96RP8 456 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 HBEGFQ99075 208 aa11.66□□□□□ -0.54
SLIRP-209ENST00000557342 GATA5Q9BWX5 397 aaPredicted RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms