RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 OR52E8Q6IFG1 317 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 SLC48A1Q6P1K1 146 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 FAM198BQ6UWH4 519 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 ERMP1Q7Z2K6 904 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 ZC3H7AQ8IWR0 971 aaKnown RBP11.74□□□□□ -0.53
SHMT2-221ENST00000555773 RIMKLAQ8IXN7 391 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 CCDC197Q8NCU1 140 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 DNAJB14Q8TBM8 379 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 FGF11Q92914 225 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 NACC2Q96BF6 587 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 RNF31Q96EP0 1072 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 CATSPER2Q96P56 530 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 ZBTB18Q99592 522 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 EFHD1Q9BUP0 239 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 MIEF1Q9NQG6 463 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 LANCL2Q9NS86 450 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 TEX10Q9NXF1 929 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-221ENST00000555773 DKK4Q9UBT3 224 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 CTSFQ9UBX1 484 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 KCND3Q9UK17 655 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 ANGPTL2Q9UKU9 493 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 CES1P1Q9UKY3 287 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 G3BP2Q9UN86 482 aaKnown RBP11.74□□□□□ -0.53
SHMT2-221ENST00000555773 PADI2Q9Y2J8 665 aa11.74□□□□□ -0.53
SHMT2-221ENST00000555773 COPG1Q9Y678 874 aaKnown RBP11.74□□□□□ -0.53
SHMT2-221ENST00000555773 GABRR3A8MPY1 467 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 PCDH17O14917 1159 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 PGRMC2O15173 223 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 SLC22A2O15244 555 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 GPR75O95800 540 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 FURINP09958 794 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 GPX3P22352 226 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 PTPRBP23467 1997 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 ALDH9A1P49189 494 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 EMP2P54851 167 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 UFM1P61960 85 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 MC1RQ01726 317 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 PDE7AQ13946 482 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 ERV3-1Q14264 604 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 DPY19L1Q2PZI1 675 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 QSOX2Q6ZRP7 698 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 CAMKMTQ7Z624 323 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 TICAM1Q8IUC6 712 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 IL22RA1Q8N6P7 574 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 FAM47BQ8NA70 645 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 OR4K14Q8NGD5 310 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 CLHC1Q8NHS4 586 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 CDC26Q8NHZ8 85 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 CT55Q8WUE5 264 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 KIAA1143Q96AT1 154 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-221ENST00000555773 TESCQ96BS2 214 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 PPCDCQ96CD2 204 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 COQ8BQ96D53 544 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 CSF3RQ99062 836 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 SPSB2Q99619 263 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 ACTL8Q9H568 366 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 ZNF385DQ9H6B1 395 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 SAR1AQ9NR31 198 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 PRTFDC1Q9NRG1 225 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 ATAD3AQ9NVI7 634 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 CROTQ9UKG9 612 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 MKL2Q9ULH7 1088 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 EXO1Q9UQ84 846 aaKnown RBP11.73□□□□□ -0.53
SHMT2-221ENST00000555773 PCDHGA6Q9Y5G7 932 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 ZNF780BQ9Y6R6 833 aa11.73□□□□□ -0.53
SHMT2-221ENST00000555773 ADAMTS20P59510 1910 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 GLOD5A6NK44 160 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 TERTO14746 1132 aaKnown RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 SCAMP2O15127 329 aaKnown RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 AKAP10O43572 662 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 CNOT3O75175 753 aaKnown RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 JRKO75564 520 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 KLF7O75840 302 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 DCTN3O75935 186 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 LRATO95237 230 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 RECKO95980 971 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 IGHEP01854 428 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 IL6P05231 212 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 HEXBP07686 556 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 COX7A2P14406 83 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 PIK3R1P27986 724 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 PTPN4P29074 926 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 DLSTP36957 453 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 PCBP4P57723 403 aaKnown RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 CBX1P83916 185 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 RHAGQ02094 409 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 STX4Q12846 297 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 SLC13A2Q13183 592 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 DNASE1L3Q13609 305 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 SERTAD2Q14140 314 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 MINDY4Q4G0A6 757 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 CPTPQ5TA50 214 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 MTDHQ86UE4 582 aaKnown RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 LAPTM4BQ86VI4 370 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 SCUBE1Q8IWY4 988 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 KRTCAP2Q8N6L1 136 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 ENDOVQ8N8Q3 282 aaKnown RBP11.72□□□□□ -0.53
SHMT2-221ENST00000555773 TMEM52Q8NDY8 209 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 OR2Y1Q8NGV0 311 aa11.72□□□□□ -0.53
SHMT2-221ENST00000555773 TSPEARQ8WU66 669 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms