RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 SERTAD3Q9UJW9 196 aa4.77□□□□□ -1.65
VTI1B-202ENST00000553619 POMT2Q9UKY4 750 aa4.77□□□□□ -1.65
VTI1B-202ENST00000553619 G3BP2Q9UN86 482 aaKnown RBP4.77□□□□□ -1.65
VTI1B-202ENST00000553619 PLCL2Q9UPR0 1127 aa4.77□□□□□ -1.65
VTI1B-202ENST00000553619 COA3Q9Y2R0 106 aaPredicted RBP4.77□□□□□ -1.65
VTI1B-202ENST00000553619 NDUFAF1Q9Y375 327 aa4.77□□□□□ -1.65
VTI1B-202ENST00000553619 EMC9Q9Y3B6 208 aa4.77□□□□□ -1.65
VTI1B-202ENST00000553619 CROCCQ5TZA2 2017 aa4.77□□□□□ -1.65
VTI1B-202ENST00000553619 ZDBF2Q9HCK1 2354 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 A0A0J9YVX5 310 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 GNG14A0A1W2PPG7 69 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 KRT87PA6NCN2 255 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CCDC154A6NI56 674 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SLC9B1P1A6NJY1 282 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 BBIP1A8MTZ0 92 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 TRIM38O00635 465 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 HAT1O14929 419 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CFLARO15519 480 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 B4GAT1O43505 415 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 LCMT2O60294 686 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 PRAMEF4O60810 478 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 RASSF9O75901 435 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CPNE6O95741 557 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 NPPAP01160 153 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 C9P02748 559 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 IL6P05231 212 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 GP1BAP07359 652 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SNRPB2P08579 225 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 KRT16P08779 473 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ANXA4P09525 319 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 COX4I1P13073 169 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CD22P20273 847 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MAGP20916 626 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 PRPS1L1P21108 318 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 PTPN4P29074 926 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 PEBP1P30086 187 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 TLX1P31314 330 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 HTR6P50406 440 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ARSFP54793 590 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CLDN8P56748 225 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 OR1D5P58170 312 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 RPL11P62913 178 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 RPL38P63173 70 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 HSD11B2P80365 405 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MXRA7P84157 204 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 HMGCS1Q01581 520 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MEF2AQ02078 507 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ACY1Q03154 408 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ILKQ13418 452 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ART3Q13508 389 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 TRA2AQ13595 282 aaKnown RBP eCLIP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 HEPACAMQ14CZ8 416 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ZIC1Q15915 447 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 AMZ1Q400G9 498 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SPATS1Q496A3 300 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 AASDHQ4L235 1098 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 RFTN2Q52LD8 501 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 AGKQ53H12 422 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 LACTB2Q53H82 288 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 TCHHL1Q5QJ38 904 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CCNYL2Q5T2Q4 361 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 YOD1Q5VVQ6 348 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 GARNL3Q5VVW2 1013 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 PRAMEF9Q5VWM5 478 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 FCRL6Q6DN72 434 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 OR4C11Q6IEV9 310 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 NOXRED1Q6NXP6 359 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CYP20A1Q6UW02 462 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ETV3LQ6ZN32 361 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MAVSQ7Z434 540 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ASPGQ86U10 573 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 NUDT13Q86X67 352 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ZNF761Q86XN6 746 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 GPR135Q8IZ08 494 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 ARHGAP24Q8N264 748 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 TMEM132CQ8N3T6 1108 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 Q8N9G6 341 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 TTC29Q8NA56 475 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 OR2L5Q8NG80 312 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 OR4D9Q8NGE8 314 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 OR8K5Q8NH50 307 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 FLVCR1-AS1Q8TAF5 88 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 IFI44Q8TCB0 444 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 JPH3Q8WXH2 748 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 TM4SF19Q96DZ7 209 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MTERF3Q96E29 417 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 CNDP2Q96KP4 475 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 GFM1Q96RP9 751 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MAP3K3Q99759 626 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 RTKNQ9BST9 563 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 SLC25A23Q9BV35 468 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 FAIM2Q9BWQ8 316 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MS4A8Q9BY19 250 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MRPL1Q9BYD6 325 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 BRINP2Q9C0B6 783 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 NMUR2Q9GZQ4 415 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 REXO4Q9GZR2 422 aaKnown RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 C1orf21Q9H246 121 aa4.76□□□□□ -1.65
VTI1B-202ENST00000553619 MMADHCQ9H3L0 296 aaPredicted RBP4.76□□□□□ -1.65
VTI1B-202ENST00000553619 RMND5AQ9H871 391 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms