RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 C5orf30Q96GV9 206 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 MAGED4Q96JG8 741 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 LURAP1Q96LR2 239 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 NEDD4LQ96PU5 975 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 ATP6V0BQ99437 205 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 NYXQ9GZU5 481 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 DBNDD1Q9H9R9 158 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 MAGEF1Q9HAY2 307 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 ATAD3AQ9NVI7 634 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 MAD2L2Q9UI95 211 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 NCKAP1Q9Y2A7 1128 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 ZNF510Q9Y2H8 683 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 TMED7Q9Y3B3 224 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 LTN1O94822 1766 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 KTN1Q86UP2 1357 aaKnown RBP4.24□□□□□ -1.73
LIMA1-205ENST00000550592 CARMIL3Q8ND23 1372 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 NRXN2Q9P2S2 1712 aa4.24□□□□□ -1.73
LIMA1-205ENST00000550592 KIAA1217Q5T5P2 1943 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 A0A087X002 238 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 A0A1W2PR80 420 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 GTPBP10A4D1E9 387 aaKnown RBP4.23□□□□□ -1.73
LIMA1-205ENST00000550592 NKX6-3A6NJ46 265 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 ZNF195O14628 629 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 GRAP2O75791 330 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 HMOX1P09601 288 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 ZNF26P17031 533 aaPredicted RBP4.23□□□□□ -1.73
LIMA1-205ENST00000550592 HLA-FP30511 346 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 NR0B1P51843 470 aaKnown RBP4.23□□□□□ -1.73
LIMA1-205ENST00000550592 PAX9P55771 341 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 XGP55808 180 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 UCP2P55851 309 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 ARF5P84085 180 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 GUCY2DQ02846 1103 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 SLC3A1Q07837 685 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 CDH18Q13634 790 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 HNRNPDQ14103 355 aaKnown RBP4.23□□□□□ -1.73
LIMA1-205ENST00000550592 CDC37Q16543 378 aaPredicted RBP4.23□□□□□ -1.73
LIMA1-205ENST00000550592 ACKR1Q16570 336 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 PRR5LQ6MZQ0 368 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 PWWP2BQ6NUJ5 590 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 FIP1L1Q6UN15 594 aaKnown RBP4.23□□□□□ -1.73
LIMA1-205ENST00000550592 MACC1Q6ZN28 852 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 Q6ZSR9 355 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 SFRP1Q8N474 314 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 TEX26Q8N6G2 289 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 TCEANCQ8N8B7 351 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 OR5T2Q8NGG2 359 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 CASP10Q92851 521 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 C2orf48Q96LS8 159 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 CDX2Q99626 313 aaPredicted RBP4.23□□□□□ -1.73
LIMA1-205ENST00000550592 ACAT2Q9BWD1 397 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 NAPBQ9H115 298 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 WDR13Q9H1Z4 485 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 DPEP2Q9H4A9 486 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 ZDHHC6Q9H6R6 413 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 DNAJC11Q9NVH1 559 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 TMEM181Q9P2C4 612 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 POLKQ9UBT6 870 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 POMT2Q9UKY4 750 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 SATB2Q9UPW6 733 aa4.23□□□□□ -1.73
LIMA1-205ENST00000550592 ZDBF2Q9HCK1 2354 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 CDHR2Q9BYE9 1310 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 CACNA1SQ13698 1873 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 A0A087WZ39 114 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 C2orf92A0A1B0GVN3 265 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 C5orf51A6NDU8 294 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 ZNF732B4DXR9 585 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 SLC1A7O00341 560 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 NR5A2O00482 541 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 MLNRO43193 412 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 CLN5O75503 358 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 SNRPD1P62314 119 aaKnown RBP4.22□□□□□ -1.73
LIMA1-205ENST00000550592 HFEQ30201 348 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 FAM106AQ4KMX7 169 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 TMEM31Q5JXX7 168 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 ATP1A1-AS1Q5TC04 95 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 TCEAL6Q6IPX3 200 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 SLC27A4Q6P1M0 643 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 ARHGAP11AQ6P4F7 1023 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 ALKBH5Q6P6C2 394 aaKnown RBP4.22□□□□□ -1.73
LIMA1-205ENST00000550592 BHLHB9Q6PI77 547 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 TRMT11Q7Z4G4 463 aaKnown RBP4.22□□□□□ -1.73
LIMA1-205ENST00000550592 CCDC185Q8N715 623 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 OR4D10Q8NGI6 311 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 OR6S1Q8NH40 331 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 CD99L2Q8TCZ2 262 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 MGARPQ8TDB4 240 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 ST7LQ8TDW4 575 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 ATP6V0A1Q93050 837 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 RFT1Q96AA3 541 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 OMA1Q96E52 524 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 FAM218AQ96MZ4 157 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 IL12RB2Q99665 862 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 RBM4Q9BWF3 364 aaKnown RBP4.22□□□□□ -1.73
LIMA1-205ENST00000550592 TSPYL1Q9H0U9 437 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 FGF22Q9HCT0 170 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 CYP39A1Q9NYL5 469 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 ANGPTL3Q9Y5C1 460 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 LAMA3Q16787 3333 aa4.22□□□□□ -1.73
LIMA1-205ENST00000550592 BRCA2P51587 3418 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms