RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 WDR41Q9HAD4 459 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 NKIRAS1Q9NYS0 192 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 TP53TG5Q9Y2B4 290 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 PCDHGB7Q9Y5F8 929 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 CLDN16Q9Y5I7 305 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 CPAMD8Q8IZJ3 1885 aa18.15■□□□□ 0.5
DDX54-207ENST00000550016 TLN1Q9Y490 2541 aaKnown RBP18.15■□□□□ 0.5
DDX54-207ENST00000550016 CNTRLQ7Z7A1 2325 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 TMEM114B3SHH9 223 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 TGFBR3LH3BV60 316 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 GUCY1B2O75343 617 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 PRR35P0CG20 571 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 GRK2P25098 689 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 ARRB2P32121 409 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 WDR4P57081 412 aaKnown RBP18.14■□□□□ 0.49
DDX54-207ENST00000550016 BTKQ06187 659 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 ACSM2AQ08AH3 577 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 STX4Q12846 297 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 RAPSNQ13702 412 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 SERTAD2Q14140 314 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 EXT1Q16394 746 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 LACTB2Q53H82 288 aaPredicted RBP18.14■□□□□ 0.49
DDX54-207ENST00000550016 CES4AQ5XG92 561 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 KANK2Q63ZY3 851 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 ACSM2BQ68CK6 577 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 PLAG1Q6DJT9 500 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 RNF165Q6ZSG1 346 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 GOLGA6L1Q8N7Z2 621 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 ANKRD9Q96BM1 317 aaPredicted RBP18.14■□□□□ 0.49
DDX54-207ENST00000550016 ATP6V1G3Q96LB4 118 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 SMAD5Q99717 465 aaKnown RBP18.14■□□□□ 0.49
DDX54-207ENST00000550016 SH3GL2Q99962 352 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 ALOXE3Q9BYJ1 711 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 ZNF71Q9NQZ8 489 aaPredicted RBP18.14■□□□□ 0.49
DDX54-207ENST00000550016 FIS1Q9Y3D6 152 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 ZNF451Q9Y4E5 1061 aa18.14■□□□□ 0.49
DDX54-207ENST00000550016 EIF4E1BA6NMX2 242 aaKnown RBP18.13■□□□□ 0.49
DDX54-207ENST00000550016 A8MUA0 341 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 K7EM74 188 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 SLC28A1O00337 649 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 LDB3O75112 727 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 ALPPP05187 535 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 NR2F6P10588 404 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 PPP2R1BP30154 601 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 ABCE1P61221 599 aaKnown RBP18.13■□□□□ 0.49
DDX54-207ENST00000550016 TRA2BP62995 288 aaKnown RBP18.13■□□□□ 0.49
DDX54-207ENST00000550016 BIKQ13323 160 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 BTBD16Q32M84 506 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 UGT3A2Q3SY77 523 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 SH2D4BQ5SQS7 431 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 VWA5B1Q5TIE3 1220 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 JMJD6Q6NYC1 403 aaPredicted RBP18.13■□□□□ 0.49
DDX54-207ENST00000550016 ATG14Q6ZNE5 492 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 ASB18Q6ZVZ8 466 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 M1APQ8TC57 530 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 APIPQ96GX9 242 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 ZNF552Q9H707 407 aaPredicted RBP18.13■□□□□ 0.49
DDX54-207ENST00000550016 PNO1Q9NRX1 252 aaKnown RBP18.13■□□□□ 0.49
DDX54-207ENST00000550016 SIRT5Q9NXA8 310 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 C5AR2Q9P296 337 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 ZDHHC2Q9UIJ5 367 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 MCM8Q9UJA3 840 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 CCL27Q9Y4X3 112 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 DNAJC15Q9Y5T4 150 aa18.13■□□□□ 0.49
DDX54-207ENST00000550016 SAGE2PA6NJ88 616 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 RGS14O43566 566 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 ITM2AO43736 263 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 RSL1D1O76021 490 aaKnown RBP18.12■□□□□ 0.49
DDX54-207ENST00000550016 SNUPNO95149 360 aaKnown RBP18.12■□□□□ 0.49
DDX54-207ENST00000550016 HSPA4LO95757 839 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 AIFM1O95831 613 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 CELA2AP08217 269 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 BGNP21810 368 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 SLC26A5P58743 744 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 RAE1P78406 368 aaKnown RBP18.12■□□□□ 0.49
DDX54-207ENST00000550016 STX3Q13277 289 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 TTMPQ5BVD1 217 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 NDUFAF5Q5TEU4 345 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 AGAP7PQ5VUJ5 663 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 GALNT18Q6P9A2 607 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 AGR3Q8TD06 166 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 MGARPQ8TDB4 240 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 TM4SF18Q96CE8 201 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 C11orf24Q96F05 449 aaPredicted RBP18.12■□□□□ 0.49
DDX54-207ENST00000550016 METTL2AQ96IZ6 378 aaKnown RBP18.12■□□□□ 0.49
DDX54-207ENST00000550016 AGAP4Q96P64 663 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 TUBB1Q9H4B7 451 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 ADAP2Q9NPF8 381 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 TEX10Q9NXF1 929 aaPredicted RBP18.12■□□□□ 0.49
DDX54-207ENST00000550016 VTI1BQ9UEU0 232 aa18.12■□□□□ 0.49
DDX54-207ENST00000550016 MYOCOSA0A1B0GUC4 107 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 GLOD5A6NK44 160 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 TMEM233B4DJY2 109 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 PGRMC2O15173 223 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 PCDH7O60245 1069 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 FGF17O60258 216 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 PRKRAO75569 313 aaKnown RBP18.11■□□□□ 0.49
DDX54-207ENST00000550016 LYPLA1O75608 230 aaPredicted RBP18.11■□□□□ 0.49
DDX54-207ENST00000550016 GPR75O95800 540 aa18.11■□□□□ 0.49
DDX54-207ENST00000550016 PDGFAP04085 211 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms