RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 TCN2P20062 427 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 IL12AP29459 219 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CD68P34810 354 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ARHGDIBP52566 201 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF234Q14588 700 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 FAM174BQ3ZCQ3 159 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 FAM78AQ5JUQ0 283 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 FAM69BQ5VUD6 431 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 KIAA0895LQ68EN5 471 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 GHDCQ8N2G8 530 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF540Q8NDQ6 660 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 NLGN4YQ8NFZ3 816 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 OR2L5Q8NG80 312 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 OR6C4Q8NGE1 309 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SETD6Q8TBK2 473 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CHPT1Q8WUD6 406 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 SIGLEC10Q96LC7 697 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 LENG8Q96PV6 779 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 CTRCQ99895 268 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 USB1Q9BQ65 265 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 PELOQ9BRX2 385 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 NPLQ9BXD5 320 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 TFB2MQ9H5Q4 396 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF696Q9H7X3 374 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZBTB20Q9HC78 741 aaPredicted RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 ZNF224Q9NZL3 707 aa8.26□□□□□ -1.09
CLIP1-218ENST00000545889 RIF1Q5UIP0 2472 aaKnown RBP8.26□□□□□ -1.09
CLIP1-218ENST00000545889 A6NLC8 198 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 NPIPA2E9PIF3 369 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 NPIPA3F8WFD2 350 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TNFRSF11BO00300 401 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TBX1O43435 398 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 CPNE3O75131 537 aaKnown RBP8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ARHGEF15O94989 841 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 EPOP01588 193 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 BPGMP07738 259 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 CD63P08962 238 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 PRPS1L1P21108 318 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 EMP2P54851 167 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 UBE2NP61088 152 aaKnown RBP8.25□□□□□ -1.09
CLIP1-218ENST00000545889 HMGCS1Q01581 520 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ALG1LQ6GMV1 187 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TANGO2Q6ICL3 276 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 LRRC70Q7Z2Q7 622 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 SLC34A3Q8N130 599 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TRAM1L1Q8N609 369 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 OR7A2PQ8NGA2 310 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 FIBINQ8TAL6 211 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ASB12Q8WXK4 309 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 CAMK1GQ96NX5 476 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 BRF2Q9HAW0 419 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TAS2R9Q9NYW1 312 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 PCDHGA6Q9Y5G7 932 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 HSD11B1P28845 292 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 PGGT1BP53609 377 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 SIM1P81133 766 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ADGRE1Q14246 886 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 SPIN4Q56A73 249 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 GLYATQ6IB77 296 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 CEP97Q8IW35 865 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ANKFN1Q8N957 763 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ENKURQ8TC29 256 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ABHD5Q8WTS1 349 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 PMM1Q92871 262 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 MYEOVQ96EZ4 313 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 HOPXQ9BPY8 73 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-218ENST00000545889 EIF2B3Q9NR50 452 aaKnown RBP8.25□□□□□ -1.09
CLIP1-218ENST00000545889 LGALS13Q9UHV8 139 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 BOLA1Q9Y3E2 137 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 IRGMA1A4Y4 181 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 PLK4O00444 970 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 BMP4P12644 408 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ABATP80404 500 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 SLC5A8Q8N695 610 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 GLB1L3Q8NCI6 653 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-218ENST00000545889 GRPEL2Q8TAA5 225 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 PIK3R3Q92569 461 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TMCO6Q96DC7 493 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 FRMD6Q96NE9 622 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 COMMD4Q9H0A8 199 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 ING3Q9NXR8 418 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 EPHA6Q9UF33 1036 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TEX264Q9Y6I9 313 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 GLOD5A6NK44 160 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 BBIP1A8MTZ0 92 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 C9JVG2 144 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 CLPXO76031 633 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 CKMT2P17540 419 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 SRYQ05066 204 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TRAF3Q13114 568 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 HNRNPA1L2Q32P51 320 aaKnown RBP8.25□□□□□ -1.09
CLIP1-218ENST00000545889 IGSF11Q5DX21 431 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 GALNTL5Q7Z4T8 443 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 MRGPRX2Q96LB1 330 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 PKP2Q99959 881 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 TRIM8Q9BZR9 551 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 GAREM1Q9H706 876 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 PAQR5Q9NXK6 330 aaPredicted RBP8.25□□□□□ -1.09
CLIP1-218ENST00000545889 COMMD9Q9P000 198 aa8.25□□□□□ -1.09
CLIP1-218ENST00000545889 EDARQ9UNE0 448 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms