RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 NPEPPSL1A6NEC2 478 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 HNRNPCL3B7ZW38 293 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 DSCR3O14972 297 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 FABP7O15540 132 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 SUV39H1O43463 412 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 IFNA14P01570 189 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 FCER2P06734 321 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 RETP07949 1114 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 POU2F2P09086 479 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 CLEC2LP0C7M8 214 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 HNRNPCL4P0DMR1 293 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 POU2F1P14859 743 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 EFNA1P20827 205 aaPredicted RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 PIK3CGP48736 1102 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ARSDP51689 593 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ALDH6A1Q02252 535 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 SCAPQ12770 1279 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 IQCCQ4KMZ1 466 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ZMAT1Q5H9K5 638 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 SPANXN4Q5MJ08 99 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 LYSMD4Q5XG99 296 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ASB18Q6ZVZ8 466 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 FAM9CQ8IZT9 166 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 NKAPQ8N5F7 415 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 CIDECQ96AQ7 238 aaPredicted RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 SH3KBP1Q96B97 665 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 EGLN2Q96KS0 407 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 UTS2RQ9UKP6 389 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 PPIEQ9UNP9 301 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 CYP8B1Q9UNU6 501 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 PCDHGB3Q9Y5G1 929 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ARL5AQ9Y689 179 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 A0A0G2JMP0 313 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 C2orf81A6NN90 581 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 J3KR12 359 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 STX16O14662 325 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 LYRM1O43325 122 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ZNF217O75362 1048 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ULK1O75385 1050 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 PTHP01270 115 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 APOC3P02656 99 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ZNF806P0C7X5 589 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 TYRP14679 529 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 NAGAP17050 411 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 NTSR1P30989 418 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 DAPP51397 102 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 RPS7P62081 194 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 ASAH1Q13510 395 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 UGT8Q16880 541 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 Q5BKY6 102 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 CAPN13Q6MZZ7 669 aaPredicted RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 MSANTD2Q6P1R3 559 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 DOK6Q6PKX4 331 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 RANBP10Q6VN20 620 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 PROKR1Q8TCW9 393 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 NETO1Q8TDF5 533 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 FOXJ1Q92949 421 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 RBPMSQ93062 196 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 ZNF599Q96NL3 588 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 DCLRE1CQ96SD1 692 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 GPR21Q99679 349 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 SPHK2Q9NRA0 654 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 WWOXQ9NZC7 414 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ACSL5Q9ULC5 683 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ASXL3Q9C0F0 2248 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ARHGAP33O14559 1287 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 PROM1O43490 865 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 MAFKO60675 156 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 TBL1XO60907 577 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 DNASE1P24855 282 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 GDI2P50395 445 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 NOVA1P51513 510 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 MAZP56270 477 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 IL2P60568 153 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 MRPS21P82921 87 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 OTUD1Q5VV17 481 aaPredicted RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 PTRHD1Q6GMV3 140 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 FAM171BQ6P995 826 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 PAQR9Q6ZVX9 377 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 ATP6V1C2Q8NEY4 427 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 PRSS33Q8NF86 280 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 RLN3Q8WXF3 142 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 OVCA2Q8WZ82 227 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 HMCESQ96FZ2 354 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 TSGA13Q96PP4 275 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 POLR1EQ9GZS1 481 aaKnown RBP8.32□□□□□ -1.08
DDB1-217ENST00000540166 LATS2Q9NRM7 1088 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 RAD18Q9NS91 495 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 MAN2B2Q9Y2E5 1009 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 HRH3Q9Y5N1 445 aa8.32□□□□□ -1.08
DDB1-217ENST00000540166 TRAV6A0A075B6T7 132 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 DCDC2BA2VCK2 349 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 ANHXE9PGG2 379 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 PCDHGA12O60330 932 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 GMDSO60547 372 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 CCNB2O95067 398 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TBX18O95935 607 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 HTR7P34969 479 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 GPC1P35052 558 aa8.31□□□□□ -1.08
DDB1-217ENST00000540166 TGFBR2P37173 567 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms