RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 CCNA1P78396 465 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 GUCY2DQ02846 1103 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 LCP2Q13094 533 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 HERC3Q15034 1050 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ANKRD55Q3KP44 614 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF260Q3ZCT1 412 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZC2HC1CQ53FD0 456 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TCTE1Q5JU00 501 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PDSS1Q5T2R2 415 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 OR7E24Q6IFN5 339 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ETFRF1Q6IPR1 90 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TYW3Q6IPR3 259 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 KLC3Q6P597 504 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SMIM29Q86T20 159 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM135Q86UB9 458 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZDHHC21Q8IVQ6 265 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 DCUN1D3Q8IWE4 304 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC83Q8IWF9 413 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FBXW8Q8N3Y1 598 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CERS5Q8N5B7 392 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SPRYD4Q8WW59 207 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 DLX4Q92988 240 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 DNAJA3Q96EY1 480 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RBM41Q96IZ5 413 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 C16orf45Q96MC5 204 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 NEDD4LQ96PU5 975 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CPXM1Q96SM3 734 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 MTERF1Q99551 399 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 HNRNPABQ99729 332 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SEMA3CQ99985 751 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 EDEM2Q9BV94 578 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 LAT2Q9GZY6 243 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 NCOR1P1Q9H4R4 102 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF556Q9HAH1 456 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 EHFQ9NZC4 300 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PKD2L2Q9NZM6 624 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RNF14Q9UBS8 474 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FAM153AQ9UHL3 310 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 MOSPD1Q9UJG1 213 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 GMEB2Q9UKD1 530 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SAMD4AQ9UPU9 718 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RNF215Q9Y6U7 377 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 IGHV4-30-2A0A087WSY4 118 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TM9SF1O15321 606 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 LRCH4O75427 683 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SYF2O95926 243 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RLN1P04808 185 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CHRNGP07510 517 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CDH1P12830 882 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CYP2A7P20853 494 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PRDX6P30041 224 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 HOXA6P31267 233 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CETN2P41208 172 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 NANOS3P60323 173 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 POLR2FP61218 127 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TRA2BP62995 288 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 NCBP1Q09161 790 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RIPPLY1Q0D2K3 151 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RPA4Q13156 261 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SQLEQ14534 574 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 KARSQ15046 597 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 HLFQ16534 295 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PRTGQ2VWP7 1150 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 KIAA1644Q3SXP7 199 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CAVIN4Q5BKX8 364 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FAM76BQ5HYJ3 339 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 WLSQ5T9L3 541 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RUSC1-AS1Q66K80 236 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 KCTD11Q693B1 232 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CAPRIN2Q6IMN6 1127 aaKnown RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SLC39A4Q6P5W5 647 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZNF549Q6P9A3 640 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CASC1Q6TDU7 716 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 BTN2A1Q7KYR7 527 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 NRARPQ7Z6K4 114 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 HOOK3Q86VS8 718 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 NLRP14Q86W24 1093 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 MAP7D3Q8IWC1 876 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CLDN19Q8N6F1 224 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SORCS1Q8WY21 1168 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 GGHQ92820 318 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 CCDC51Q96ER9 411 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 IGSF21Q96ID5 467 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FAM71F1Q96KD3 344 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 OR2B2Q9GZK3 357 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 C6orf106Q9H6K1 298 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 OLFML3Q9NRN5 406 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PIGVQ9NUD9 493 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 PDRG1Q9NUG6 133 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 TMEM181Q9P2C4 612 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 STOX2Q9P2F5 926 aaPredicted RBP0.92□□□□□ -2.26
HIF1A-204ENST00000539097 RNF7Q9UBF6 113 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 LHX3Q9UBR4 397 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 MALT1Q9UDY8 824 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 SLC24A2Q9UI40 661 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 DNPEPQ9ULA0 475 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 NEDD4P46934 1319 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 FRAS1Q86XX4 4008 aa0.92□□□□□ -2.26
HIF1A-204ENST00000539097 ZCCHC6Q5VYS8 1495 aaKnown RBP0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms