RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 ARL5AQ9Y689 179 aa2.47□□□□□ -2.01
TNFRSF1A-210ENST00000537842 AKAP9Q99996 3911 aa2.47□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PLXNA2O75051 1894 aa2.47□□□□□ -2.01
TNFRSF1A-210ENST00000537842 USP9XQ93008 2570 aaPredicted RBP2.47□□□□□ -2.01
TNFRSF1A-210ENST00000537842 LRRK2Q5S007 2527 aa2.46□□□□□ -2.01
TNFRSF1A-210ENST00000537842 PIPSLA2A3N6 862 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HTR3EA5X5Y0 456 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ANXA2P2A6NMY6 339 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 LINC00473A8K010 186 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 MEI4A8MW99 385 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GPR89AB7ZAQ6 455 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 E7ENX8 843 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 H7C0C1 242 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RASGRF2O14827 1237 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 MGST3O14880 152 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SMAD9O15198 467 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 NKX2-8O15522 239 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 KCNN4O15554 427 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 DHHO43323 396 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PROM1O43490 865 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 B4GAT1O43505 415 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TNFSF14O43557 240 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 LDB2O43679 373 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 LIASO43766 372 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 KIF5CO60282 957 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SOCS5O75159 536 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 MTX2O75431 263 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TM7SF2O76062 418 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 WDR47O94967 919 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SNX4O95219 450 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TRIM16O95361 564 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HLA-DQA2P01906 255 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FGGP02679 453 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CSF2P04141 144 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TUBB4AP04350 444 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HIST1H2ABP04908 130 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PCCBP05166 539 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FGF1P05230 155 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FESP07332 822 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HOXC4P09017 264 aaPredicted RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HOXB5P09067 269 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TPM1P09493 284 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GPR89BP0CG08 455 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ZNF883P0CG24 379 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 EGR2P11161 476 aaPredicted RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CYP4B1P13584 511 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CEACAM1P13688 526 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HIST1H2ADP20671 130 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CSRP1P21291 193 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TGM2P21980 687 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HNRNPA2B1P22626 353 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 IVDP26440 423 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 AK4P27144 223 aaPredicted RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PPIFP30405 207 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 AKT2P31751 481 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PCGF2P35227 344 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RPL22P35268 128 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SKIV2L2P42285 1042 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ATP5OP48047 213 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 NR2C2P49116 596 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SPINT3P49223 89 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 LUMP51884 338 aaPredicted RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CTSCP53634 463 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GSDMDP57764 484 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SLC26A5P58743 744 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 EIF3EP60228 445 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SRP54P61011 504 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CRADDP78560 199 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CDK3Q00526 305 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TAP2Q03519 686 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CDK18Q07002 472 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 DPTQ07507 201 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 BCL2L1Q07817 233 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 FOXI1Q12951 378 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 XRCC4Q13426 336 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SNX1Q13596 522 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 PEX6Q13608 980 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TFDP2Q14188 446 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ZNF235Q14590 738 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 RPS6KA1Q15418 735 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TRIP13Q15645 432 aaPredicted RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TRIP6Q15654 476 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SLC1A5Q15758 541 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TBCCQ15814 346 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 CHRNA6Q15825 494 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ERCC6LQ2NKX8 1250 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TYSND1Q2T9J0 566 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ZNF658BQ4V348 819 aaPredicted RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ATP13A5Q4VNC0 1218 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SLC9B1Q4ZJI4 515 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 IGSF11Q5DX21 431 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 KRBOX4Q5JUW0 171 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 HENMT1Q5T8I9 393 aaKnown RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 ARMC12Q5T9G4 340 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 LCE5AQ5TCM9 118 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 GKAP1Q5VSY0 366 aaPredicted RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 SP5Q6BEB4 398 aaPredicted RBP2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 KIAA1161Q6NSJ0 714 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 MTFR2Q6P444 385 aa2.46□□□□□ -2.02
TNFRSF1A-210ENST00000537842 TMEM81Q6P7N7 255 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms