RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 ZNF99A8MXY4 864 aaPredicted RBP8.84□□□□□ -1
UBE3B-207ENST00000537063 GABRB1P18505 474 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 RHCEP18577 417 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 CBLP22681 906 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 MASP1P48740 699 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 MVKQ03426 396 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 HTR4Q13639 388 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 EXOC3L2Q2M3D2 409 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 SYT6Q5T7P8 510 aaPredicted RBP8.84□□□□□ -1
UBE3B-207ENST00000537063 ZNF425Q6IV72 752 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 CEACAM20Q6UY09 585 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 USP30Q70CQ3 517 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 MTSS1LQ765P7 747 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 AMER3Q8N944 861 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 DENND6BQ8NEG7 585 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 OR2L3Q8NG85 312 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 OR14C36Q8NHC7 312 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 FUNDC2Q9BWH2 189 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 XKR8Q9H6D3 395 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 RUBCNLQ9H714 662 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 FGF22Q9HCT0 170 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 PRM3Q9NNZ6 103 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 IMP3Q9NV31 184 aaKnown RBP8.84□□□□□ -1
UBE3B-207ENST00000537063 SCHIP1Q9P0W5 487 aaPredicted RBP8.84□□□□□ -1
UBE3B-207ENST00000537063 ERVK-18Q9QC07 812 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 KLF15Q9UIH9 416 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 PCOLCE2Q9UKZ9 415 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 RNF6Q9Y252 685 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 HEBP2Q9Y5Z4 205 aa8.84□□□□□ -1
UBE3B-207ENST00000537063 LATO43561 262 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 INMTO95050 263 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 MFN2O95140 757 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 GABARAPO95166 117 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 DNTTP04053 509 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 TSFMP43897 325 aaKnown RBP8.83□□□□□ -1
UBE3B-207ENST00000537063 OR1E2P47887 323 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 MANFP55145 182 aaKnown RBP8.83□□□□□ -1
UBE3B-207ENST00000537063 PPP2CBP62714 309 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 PPP2CAP67775 309 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 SPIBQ01892 262 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 KCNC4Q03721 635 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 PUM1Q14671 1186 aaKnown RBP eCLIP8.83□□□□□ -1
UBE3B-207ENST00000537063 CTF1Q16619 201 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 TMEM64Q6YI46 380 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 PRSS48Q7RTY5 328 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 LGI4Q8N135 537 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 MS4A6EQ96DS6 147 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 YIPF6Q96EC8 236 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 SLC6A17Q9H1V8 727 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 OSGEPL1Q9H4B0 414 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 MRPS30Q9NP92 439 aaKnown RBP8.83□□□□□ -1
UBE3B-207ENST00000537063 RLIMQ9NVW2 624 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 ASB4Q9Y574 426 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.83□□□□□ -1
UBE3B-207ENST00000537063 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.83□□□□□ -1
UBE3B-207ENST00000537063 PRSS38A1L453 326 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 RFXAPO00287 272 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 MAN2B1O00754 1011 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 HAT1O14929 419 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 NOL3O60936 208 aaKnown RBP8.83□□□□□ -1
UBE3B-207ENST00000537063 CALRP27797 417 aaKnown RBP8.83□□□□□ -1
UBE3B-207ENST00000537063 CDH12P55289 794 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 CEBPEQ15744 281 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 NPTX1Q15818 432 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 C6orf120Q7Z4R8 191 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 GPR32P1Q8NGA4 272 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 SFXN5Q8TD22 340 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 AMDHD1Q96NU7 426 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 DCUN1D5Q9BTE7 237 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 DPH7Q9BTV6 452 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 PRDM7Q9NQW5 492 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 SCN3BQ9NY72 215 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 MSRAQ9UJ68 235 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 ACAD8Q9UKU7 415 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 DSPPQ9NZW4 1301 aa8.83□□□□□ -1
UBE3B-207ENST00000537063 OR52A4PA6NMU1 304 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 CTHP32929 405 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 AQP6Q13520 282 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 DUSP7Q16829 419 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 ABHD17CQ6PCB6 329 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 FBXL6Q8N531 539 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 MFSD9Q8NBP5 474 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 TMEM19Q96HH6 336 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 OR2M4Q96R27 311 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 FUZQ9BT04 418 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 KLHL31Q9H511 634 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 SYNPO2LQ9H987 977 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 PRDM8Q9NQV8 689 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 PCDHGA4Q9Y5G9 962 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 SNX11Q9Y5W9 270 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 SNX8Q9Y5X2 465 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 PRAMEF27A3QJZ7 478 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 J3KTA2 159 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 FFAR1O14842 300 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 AXIN1O15169 862 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 PDE9AO76083 593 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 EGFP01133 1207 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 STT3AP46977 705 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 ALDH9A1P49189 494 aa8.82□□□□□ -1
UBE3B-207ENST00000537063 SMN1Q16637 294 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms