RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 C10orf82Q8WW14 230 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 SPSB2Q99619 263 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 RBCK1Q9BYM8 510 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 SOX17Q9H6I2 414 aaPredicted RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 PRDM9Q9NQV7 894 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 HEY2Q9UBP5 337 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 MKL2Q9ULH7 1088 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 TRIM33Q9UPN9 1127 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PTRH2Q9Y3E5 179 aaKnown RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 OR2W5A6NFC9 320 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 GLOD5A6NK44 160 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PRMT3O60678 531 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PRKRAO75569 313 aaKnown RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 CDC123O75794 336 aaPredicted RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 FAM107AO95990 144 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 NCF2P19878 526 aaPredicted RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 DDCP20711 480 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PRPS1L1P21108 318 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 F8A1P23610 371 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PTPN4P29074 926 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 ALDH9A1P49189 494 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 HNRNPFP52597 415 aaKnown RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 CLDN8P56748 225 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 BTG2P78543 158 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 MINDY4Q4G0A6 757 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 MFSD4BQ5TF39 518 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 ZNF248Q8NDW4 579 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PLPP5Q8NEB5 264 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 OR2Y1Q8NGV0 311 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 GFM2Q969S9 779 aaKnown RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 KIAA1143Q96AT1 154 aaPredicted RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 BRINP2Q9C0B6 783 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 REEP4Q9H6H4 257 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PRTFDC1Q9NRG1 225 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 CES1P1Q9UKY3 287 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PSME2Q9UL46 239 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 TCFL5Q9UL49 500 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 EXO1Q9UQ84 846 aaKnown RBP14.66□□□□□ -0.06
CNN1-202ENST00000535659 PADI2Q9Y2J8 665 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 PCDHGA6Q9Y5G7 932 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 CEP295Q9C0D2 2601 aa14.66□□□□□ -0.06
CNN1-202ENST00000535659 FER1L5A0AVI2 2057 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 AKAP10O43572 662 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 TLX3O43711 291 aaPredicted RBP14.65□□□□□ -0.06
CNN1-202ENST00000535659 LRATO95237 230 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 RECKO95980 971 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 CAPNS1P04632 268 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 HEXBP07686 556 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 EMP2P54851 167 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 FOXL2P58012 376 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 IRX1P78414 480 aaPredicted RBP14.65□□□□□ -0.06
CNN1-202ENST00000535659 ACTN3Q08043 901 aaPredicted RBP14.65□□□□□ -0.06
CNN1-202ENST00000535659 SLC13A2Q13183 592 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 CLN3Q13286 438 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 SLC48A1Q6P1K1 146 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 QSOX2Q6ZRP7 698 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 TMEM151BQ8IW70 566 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 RIMKLAQ8IXN7 391 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 MMP21Q8N119 569 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 SNIP1Q8TAD8 396 aaKnown RBP14.65□□□□□ -0.06
CNN1-202ENST00000535659 DNAJB14Q8TBM8 379 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 MTERF3Q96E29 417 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 MARK4Q96L34 752 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 PTCHD1Q96NR3 888 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 CATSPER2Q96P56 530 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 EFHD1Q9BUP0 239 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 TMEM121BQ9BXQ6 578 aaPredicted RBP14.65□□□□□ -0.06
CNN1-202ENST00000535659 DPY30Q9C005 99 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 VN1R1Q9GZP7 353 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 GPN2Q9H9Y4 310 aaPredicted RBP14.65□□□□□ -0.06
CNN1-202ENST00000535659 TAS2R7Q9NYW3 318 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 EHD3Q9NZN3 535 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 C3orf18Q9UK00 162 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 MAPRE3Q9UPY8 281 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 MMACHCQ9Y4U1 282 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 CHD8Q9HCK8 2581 aa14.65□□□□□ -0.06
CNN1-202ENST00000535659 ZFHX4Q86UP3 3567 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 GABRR3A8MPY1 467 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 IDSB3KWA1 339 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 ANKRD28O15084 1053 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 LDB3O75112 727 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 GPR75O95800 540 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 CYC1P08574 325 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 FURINP09958 794 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 FOLR3P41439 243 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 RHAGQ02094 409 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 PDCD4Q53EL6 469 aaKnown RBP14.64□□□□□ -0.07
CNN1-202ENST00000535659 FAM69BQ5VUD6 431 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 OR52E8Q6IFG1 317 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 R3HCC1LQ7Z5L2 792 aaKnown RBP14.64□□□□□ -0.07
CNN1-202ENST00000535659 TICAM1Q8IUC6 712 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 SCUBE1Q8IWY4 988 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 OR4N5Q8IXE1 308 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 KRTCAP2Q8N6L1 136 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 C7orf57Q8NEG2 295 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 KCNE4Q8WWG9 221 aa14.64□□□□□ -0.07
CNN1-202ENST00000535659 ANKRD9Q96BM1 317 aaPredicted RBP14.64□□□□□ -0.07
CNN1-202ENST00000535659 NAF1Q96HR8 494 aaKnown RBP14.64□□□□□ -0.07
CNN1-202ENST00000535659 PRPF18Q99633 342 aaKnown RBP14.64□□□□□ -0.07
CNN1-202ENST00000535659 CRB3Q9BUF7 120 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms