RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 RPS13P62277 151 aaKnown RBP13.08□□□□□ -0.32
SF3B2-215ENST00000534307 SERTAD2Q14140 314 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 AP5B1Q2VPB7 878 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 RNFT1Q5M7Z0 435 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 MRM1Q6IN84 353 aaKnown RBP13.08□□□□□ -0.32
SF3B2-215ENST00000534307 TAOK1Q7L7X3 1001 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 TMEM132CQ8N3T6 1108 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 ZCCHC7Q8N3Z6 543 aaKnown RBP13.08□□□□□ -0.32
SF3B2-215ENST00000534307 TMEM151AQ8N4L1 468 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 PTGR2Q8N8N7 351 aaPredicted RBP13.08□□□□□ -0.32
SF3B2-215ENST00000534307 MORN4Q8NDC4 146 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 OR52B6Q8NGF0 335 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 KIF18AQ8NI77 898 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 UHMK1Q8TAS1 419 aaKnown RBP13.08□□□□□ -0.32
SF3B2-215ENST00000534307 RGMAQ96B86 450 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 ALOXE3Q9BYJ1 711 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 PSD3Q9NYI0 1048 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 PCTPQ9UKL6 214 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 PPT2Q9UMR5 302 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 NFU1Q9UMS0 254 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 RNF11Q9Y3C5 154 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 ANGPTL3Q9Y5C1 460 aa13.08□□□□□ -0.32
SF3B2-215ENST00000534307 A0A0A6YYD5 115 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 MYOCOSA0A1B0GUC4 107 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 TRIM49D1C9J1S8 452 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 POC1B-GALNT4F8VUJ3 575 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 STX16-NPEPL1H3BU86 382 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 FOXE1O00358 373 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 STX16O14662 325 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 FGF17O60258 216 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ZG16O60844 167 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ITGA10O75578 1167 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ZFAND5O76080 213 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 SBK3P0C264 359 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 HNRNPH2P55795 449 aaKnown RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 PER3P56645 1201 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 STX4Q12846 297 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 TRAF3Q13114 568 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 SLAMF1Q13291 335 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 CUL3Q13618 768 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 DDX39BQ13838 428 aaKnown RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ZRSR2Q15696 482 aaKnown RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 CPSF6Q16630 551 aaKnown RBP eCLIP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 MAPKAPK3Q16644 382 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 TSNAXIP1Q2TAA8 658 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 C16orf47Q6ZP98 133 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 FJX1Q86VR8 437 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 MYLK4Q86YV6 388 aaPredicted RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 CHERPQ8IWX8 916 aaKnown RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 CEP112Q8N8E3 955 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ZNF321PQ8N8H1 164 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 OR14A16Q8NHC5 309 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 DAZLQ92904 295 aaKnown RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 REPS1Q96D71 796 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 PHF21BQ96EK2 531 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 GPR137Q96N19 417 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 NSUN5Q96P11 429 aaKnown RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 TXLNGYQ9BZA5 131 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 NOL11Q9H8H0 719 aaKnown RBP13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ZBTB26Q9HCK0 441 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 MS4A12Q9NXJ0 267 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 FBXW2Q9UKT8 454 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 TMCO1Q9UM00 188 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ZNF835Q9Y2P0 537 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 ATG4BQ9Y4P1 393 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 IKBKGQ9Y6K9 419 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 CLCA3PQ9Y6N3 262 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 SPACA6W5XKT8 324 aa13.07□□□□□ -0.32
SF3B2-215ENST00000534307 TMPRSS11DO60235 418 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 EEDO75530 441 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 CLDN9O95484 217 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 IFNA16P05015 189 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 RPS17P08708 135 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 CPN2P22792 545 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 PTX3P26022 381 aaPredicted RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 BSGP35613 385 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 CA7P43166 264 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 RAP1GDS1P52306 607 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 TNFRSF17Q02223 184 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 ALDH6A1Q02252 535 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 ID2Q02363 134 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 KRTCAP3Q53RY4 240 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 C18orf63Q68DL7 685 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 TIFABQ6ZNK6 161 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 Q6ZPB1 254 aaPredicted RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 MDGA2Q7Z553 956 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 GPR180Q86V85 440 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 CPSF7Q8N684 471 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 FAM98AQ8NCA5 519 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 LRRN4CLQ8ND94 238 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 OR8K3Q8NH51 312 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 SLC2A12Q8TD20 617 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 ZNF721Q8TF20 911 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 CDK15Q96Q40 435 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 MRPL57Q9BQC6 102 aaKnown RBP13.06□□□□□ -0.32
SF3B2-215ENST00000534307 CCDC77Q9BR77 488 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 CENPKQ9BS16 269 aa13.06□□□□□ -0.32
SF3B2-215ENST00000534307 NTMT1Q9BV86 223 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms