RNA–Protein interactions for RNA: ENST00000533870.1

SOX6-217, Transcript of SRY-box 6, humanhuman

TSL 5

Gene SOX6, Length 7,224 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-217ENST00000533870 SNAPINO95295 136 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CLIC3O95833 236 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 UBBP0CG47 229 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 UBCP0CG48 685 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 MAT2AP31153 395 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 RPS27AP62979 156 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 UBA52P62987 128 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 TATDN3Q17R31 274 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 INAVAQ3KP66 663 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 XAF1Q6GPH4 301 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 DLEU7Q6UYE1 221 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 RTL4Q6ZR62 310 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SLC16A12Q6ZSM3 486 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 RNF113BQ8IZP6 322 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 SFXN5Q8TD22 340 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CNOT9Q92600 299 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 CCDC3Q9BQI4 270 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 BTBD2Q9BX70 525 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 TMPRSS13Q9BYE2 586 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SPON1Q9HCB6 807 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SCML1Q9UN30 329 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 PCDHB7Q9Y5E2 793 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 RIMS1Q86UR5 1692 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 GRM6O15303 877 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 P2RX6O15547 441 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 TP53P04637 393 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 H2AFB2P0C5Z0 115 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ACP2P11117 423 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CYP4B1P13584 511 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NOS3P29474 1203 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 GABRA5P31644 462 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SSR2P43308 183 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 APLP1P51693 650 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 GP2P55259 537 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 KCNA10Q16322 511 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SIRPB2Q5JXA9 342 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 RAB11FIP2Q7L804 512 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 AMZ2Q86W34 360 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ZNF440Q8IYI8 595 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ADGRG2Q8IZP9 1017 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 FTMTQ8N4E7 242 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ADAMTS18Q8TE60 1221 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NXPE2Q96DL1 559 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 S100A16Q96FQ6 103 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 TEPSINQ96N21 525 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 S100A13Q99584 98 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SLC25A21Q9BQT8 299 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 EPHX3Q9H6B9 360 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ELAC1Q9H777 363 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 PIH1D1Q9NWS0 290 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 MS4A12Q9NXJ0 267 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NLKQ9UBE8 527 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ACSL6Q9UKU0 697 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 KDM3BQ7LBC6 1761 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 A0A1W2PRQ8 180 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CDHR4A6H8M9 788 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SHOXO15266 292 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 KRT33AO76009 404 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 PFKMP08237 780 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ALDOCP09972 364 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 SBK3P0C264 359 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SDC1P18827 310 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ACVR2AP27037 513 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 GRK5P34947 590 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 HK3P52790 923 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 STXBP1P61764 594 aaKnown RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 MAP2K5Q13163 448 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NFATC2Q13469 925 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CAMK2BQ13554 666 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NOMO2Q5JPE7 1267 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 NBPF12Q5TAG4 269 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 ANKRD54Q6NXT1 300 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 UQCC3Q6UW78 93 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 BPHLQ86WA6 291 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 SYNPOQ8N3V7 929 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ATP6V1C2Q8NEY4 427 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 BEST4Q8NFU0 473 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 OR2T33Q8NG76 320 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ZNF417Q8TAU3 575 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 TRAPPC12Q8WVT3 735 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SLCO4A1Q96BD0 722 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 MAP6Q96JE9 813 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SPATA17Q96L03 361 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 OR4K3Q96R72 315 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 GLIS2Q9BZE0 524 aaPredicted RBP3.88□□□□□ -1.79
SOX6-217ENST00000533870 SLC25A32Q9H2D1 315 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SGK2Q9HBY8 427 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 POU2F3Q9UKI9 436 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SLC35A3Q9Y2D2 325 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 SLC27A5Q9Y2P5 690 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 IGLV3-10A0A075B6K4 115 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 TBC1D3EA0A087X179 549 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 MYOCOSA0A1B0GUC4 107 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 C12orf71A8MTZ7 269 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 C1QTNF3-AMACRE9PGA6 284 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 KIAA0355O15063 1070 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 TSC22D2O75157 780 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 CKMP06732 381 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 TYRP1P17643 537 aa3.88□□□□□ -1.79
SOX6-217ENST00000533870 ATF4P18848 351 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms