RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 LILRB3O75022 631 aa14.19□□□□□ -0.14
PCDHA9-202ENST00000532602 S1PR4O95977 384 aa14.19□□□□□ -0.14
PCDHA9-202ENST00000532602 XRCC1P18887 633 aaPredicted RBP14.19□□□□□ -0.14
PCDHA9-202ENST00000532602 MLLT10P55197 1068 aa14.19□□□□□ -0.14
PCDHA9-202ENST00000532602 FADDQ13158 208 aa14.19□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF334Q9HCZ1 680 aaPredicted RBP14.19□□□□□ -0.14
PCDHA9-202ENST00000532602 H3BUI4 141 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 CD36P16671 472 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 RBM34P42696 430 aaKnown RBP14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 CLRN1P58418 232 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 DEFB134Q4QY38 66 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 CYBRD1Q53TN4 286 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ALDH16A1Q8IZ83 802 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 TM9SF3Q9HD45 589 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 TRIM64A6NGJ6 449 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 TIA1P31483 386 aaKnown RBP eCLIP14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 OR1E2P47887 323 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 SLC6A11P48066 632 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 SLAMF1Q13291 335 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 FAM180BQ6P0A1 224 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 KCTD18Q6PI47 426 aaPredicted RBP14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ASB18Q6ZVZ8 466 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 MFSD2AQ8NA29 543 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF784Q8NCA9 323 aaPredicted RBP14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ZDHHC1Q8WTX9 485 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 GDE1Q9NZC3 331 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 AASSQ9UDR5 926 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 SLC7A8Q9UHI5 535 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 RABL3Q5HYI8 236 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 UNC5DQ6UXZ4 953 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 CXCL16Q9H2A7 254 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ZBTB26Q9HCK0 441 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 LAMP5Q9UJQ1 280 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 HIDE1A8MVS5 230 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ACOX3O15254 700 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 PRH1P02810 166 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 CLDN2P57739 230 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 DSG2Q14126 1118 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 MAD2L1BPQ15013 274 aaPredicted RBP14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ODF4Q2M2E3 257 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 OGFOD2Q6N063 350 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF565Q8N9K5 539 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 PCDHGB6Q9Y5F9 930 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 PRAMEF33A0A0G2JMD5 474 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 NUAK1O60285 661 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 PRAMEF10O60809 474 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 BCAS2O75934 225 aaPredicted RBP14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 DRD2P14416 443 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 HMGCLP35914 325 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 OR4D1Q15615 310 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 DEFB110Q30KQ9 67 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 RPL13AP3Q6NVV1 102 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF227Q86WZ6 799 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 GNPDA2Q8TDQ7 276 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 NINJ1Q92982 152 aa14.18□□□□□ -0.14
PCDHA9-202ENST00000532602 SOX14O95416 240 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 THEGLP0DJG4 465 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 F8A1P23610 371 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 EGFLAMQ63HQ2 1017 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 GPAT4Q86UL3 456 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 LRRC25Q8N386 305 aaPredicted RBP14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 TTTY10Q9BZA0 68 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 CIB4A0PJX0 185 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 PGCP20142 388 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 CD9P21926 228 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 GABRA3P34903 492 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 NUDT1P36639 197 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 MLLT1Q03111 559 aaPredicted RBP14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 RAB39AQ14964 217 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 STON2Q8WXE9 905 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 BMFQ96LC9 184 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 CCDC59Q9P031 241 aaKnown RBP14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 NHSL1Q5SYE7 1610 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 A0A1B0GVT2 93 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 ZBTB42B2RXF5 422 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 J3QLW9 94 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 ACOT7O00154 380 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 SMAD6O43541 496 aaKnown RBP14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF19P17023 458 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 PVALBP20472 110 aaPredicted RBP14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 ARSFP54793 590 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 GBX1Q14549 363 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 CEP76Q8TAP6 659 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 F2RL3Q96RI0 385 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 NAA11Q9BSU3 229 aaPredicted RBP14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 GJD2Q9UKL4 321 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 PCDHGA3Q9Y5H0 932 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 TLX2O43763 284 aaPredicted RBP14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 IL3P08700 152 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 ITIH1P19827 911 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 SPINT3P49223 89 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 GRB7Q14451 532 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF234Q14588 700 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 IER5LQ5T953 404 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 ZNF440Q8IYI8 595 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 C5orf51A6NDU8 294 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 OR12D1P0DN82 309 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 AOC1P19801 751 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 ARPC4P59998 168 aa14.17□□□□□ -0.14
PCDHA9-202ENST00000532602 CSTF1Q05048 431 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms