RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ANKRD33BA6NCL7 494 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 LCMT2O60294 686 aaKnown RBP7.52□□□□□ -1.21
CD44-232ENST00000531118 TMCC2O75069 709 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 AVILO75366 819 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 METTL18O95568 372 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 SYF2O95926 243 aaKnown RBP7.52□□□□□ -1.21
CD44-232ENST00000531118 CDH1P12830 882 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 GDF1P27539 372 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 MC3RP41968 323 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 ZBED6P86452 979 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 CDH17Q12864 832 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 FOXF2Q12947 444 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 DUSP8Q13202 625 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 RPS6KA1Q15418 735 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 SLC18A3Q16572 532 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 KLHL38Q2WGJ6 581 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 DCST1Q5T197 706 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 CCDC181Q5TID7 509 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 DARS2Q6PI48 645 aaKnown RBP7.52□□□□□ -1.21
CD44-232ENST00000531118 PLEKHM3Q6ZWE6 761 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 CA13Q8N1Q1 262 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 MPP5Q8N3R9 675 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 TMEM151AQ8N4L1 468 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 ZBED6CLQ96FA7 236 aaPredicted RBP7.52□□□□□ -1.21
CD44-232ENST00000531118 TIMP4Q99727 224 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 RHBGQ9H310 441 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 GOLPH3Q9H4A6 298 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 LIN7BQ9HAP6 207 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 SH2D2AQ9NP31 389 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 ADAP2Q9NPF8 381 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 PSD3Q9NYI0 1048 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 ZNF226Q9NYT6 803 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 ANAPC5Q9UJX4 755 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 CAMK2AQ9UQM7 478 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 TCAF1Q9Y4C2 921 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 CLDN16Q9Y5I7 305 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 WIF1Q9Y5W5 379 aa7.52□□□□□ -1.21
CD44-232ENST00000531118 C4orf51C9J302 202 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 CHRM3P20309 590 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 GRK3P35626 688 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 SKIV2L2P42285 1042 aaKnown RBP7.51□□□□□ -1.21
CD44-232ENST00000531118 RGS1Q08116 209 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 SF3B4Q15427 424 aaKnown RBP eCLIP7.51□□□□□ -1.21
CD44-232ENST00000531118 ETFDHQ16134 617 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 PARP6Q2NL67 630 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 P3H1Q32P28 736 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 OPN5Q6U736 354 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 HSDL2Q6YN16 418 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 C17orf64Q86WR6 236 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 REXO1L1PQ8IX06 675 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 PPHLN1Q8NEY8 458 aaKnown RBP7.51□□□□□ -1.21
CD44-232ENST00000531118 NT5CQ8TCD5 201 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 PAQR8Q8TEZ7 354 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 LPGAT1Q92604 370 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 ZNF597Q96LX8 424 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 ZFP3Q96NJ6 502 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 NAP1L5Q96NT1 182 aaPredicted RBP7.51□□□□□ -1.21
CD44-232ENST00000531118 WFIKKN1Q96NZ8 548 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 BIRC8Q96P09 236 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 MED18Q9BUE0 208 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 PIGMQ9H3S5 423 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 PACSIN3Q9UKS6 424 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 SOX13Q9UN79 622 aa7.51□□□□□ -1.21
CD44-232ENST00000531118 TENM1Q9UKZ4 2725 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 CD3EAPO15446 510 aaKnown RBP7.5□□□□□ -1.21
CD44-232ENST00000531118 NRDCO43847 1150 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 NDUFS3O75489 264 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 ZNF189O75820 626 aaPredicted RBP7.5□□□□□ -1.21
CD44-232ENST00000531118 LRATO95237 230 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 SERPIND1P05546 499 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 ADRA1DP25100 572 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 THBS2P35442 1172 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 SLCO1A2P46721 670 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 HNRNPFP52597 415 aaKnown RBP7.5□□□□□ -1.21
CD44-232ENST00000531118 DIO3P55073 304 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 RNF4P78317 190 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 PWP1Q13610 501 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 RCAN2Q14206 197 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 ELAVL1Q15717 326 aaKnown RBP7.5□□□□□ -1.21
CD44-232ENST00000531118 BHLHB9Q6PI77 547 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 SYDE1Q6ZW31 735 aaPredicted RBP7.5□□□□□ -1.21
CD44-232ENST00000531118 LINC00523Q86TU6 105 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 GCNT2Q8N0V5 402 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 OTUD6BQ8N6M0 293 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 ZNF321PQ8N8H1 164 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 TC2NQ8N9U0 490 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 TMEM52Q8NDY8 209 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 OR8K3Q8NH51 312 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 GIMAP7Q8NHV1 300 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 UTP15Q8TED0 518 aaKnown RBP7.5□□□□□ -1.21
CD44-232ENST00000531118 KRT35Q92764 455 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 PEX13Q92968 403 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 WDYHV1Q96HA8 205 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 JSRP1Q96MG2 331 aaPredicted RBP7.5□□□□□ -1.21
CD44-232ENST00000531118 TCF12Q99081 682 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 UGT2B28Q9BY64 529 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 CALHM2Q9HA72 323 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 CLK4Q9HAZ1 481 aaKnown RBP7.5□□□□□ -1.21
CD44-232ENST00000531118 LRTM1Q9HBL6 345 aa7.5□□□□□ -1.21
CD44-232ENST00000531118 PROK2Q9HC23 129 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms