RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 A0A1W2PS29 197 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 MANBAO00462 879 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 CLDN4O14493 209 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 CTNSO60931 367 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 WISP1O95388 367 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 NAGLUP54802 743 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 TNFRSF17Q02223 184 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 CCDC153Q494R4 210 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 MRM1Q6IN84 353 aaKnown RBP17.49■□□□□ 0.39
GMDS-208ENST00000530927 H3F3CQ6NXT2 135 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 DGAT2L6Q6ZPD8 337 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 GPR180Q86V85 440 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 C10orf107Q8IVU9 208 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 ZCCHC7Q8N3Z6 543 aaKnown RBP17.49■□□□□ 0.39
GMDS-208ENST00000530927 BANPQ8N9N5 519 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 ADAMTS18Q8TE60 1221 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 THAP3Q8WTV1 239 aaPredicted RBP17.49■□□□□ 0.39
GMDS-208ENST00000530927 SNRNP40Q96DI7 357 aaKnown RBP17.49■□□□□ 0.39
GMDS-208ENST00000530927 SERPINI1Q99574 410 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 CENPKQ9BS16 269 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 DDX31Q9H8H2 851 aaKnown RBP17.49■□□□□ 0.39
GMDS-208ENST00000530927 TEX10Q9NXF1 929 aaPredicted RBP17.49■□□□□ 0.39
GMDS-208ENST00000530927 STMN3Q9NZ72 180 aa17.49■□□□□ 0.39
GMDS-208ENST00000530927 MRPS33Q9Y291 106 aaKnown RBP17.49■□□□□ 0.39
GMDS-208ENST00000530927 PROM1O43490 865 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 PRKNO60260 465 aaPredicted RBP17.48■□□□□ 0.39
GMDS-208ENST00000530927 IFNA16P05015 189 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 KLK1P06870 262 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 FAM58BPP0C7Q3 252 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 CPA3P15088 417 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 UQCRFS1P47985 274 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 LCP2Q13094 533 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 PCLAFQ15004 111 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 ACER2Q5QJU3 275 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 ABHD17BQ5VST6 288 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 MMP21Q8N119 569 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 APCDD1LQ8NCL9 501 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 AGAP11Q8TF27 550 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 NCLNQ969V3 563 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 PPWD1Q96BP3 646 aaKnown RBP17.48■□□□□ 0.39
GMDS-208ENST00000530927 APOPT1Q96IL0 206 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 PKNOX2Q96KN3 472 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 CDCP1Q9H5V8 836 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 LIN28AQ9H9Z2 209 aaKnown RBP17.48■□□□□ 0.39
GMDS-208ENST00000530927 MID1IP1Q9NPA3 183 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 ASF1BQ9NVP2 202 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 PSD3Q9NYI0 1048 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 SHANK1Q9Y566 2161 aa17.48■□□□□ 0.39
GMDS-208ENST00000530927 TRBV11-1A0A0K0K1C0 115 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 GOLGA6L10A6NI86 522 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 AIFM1O95831 613 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 TPP2P29144 1249 aaPredicted RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 TSFMP43897 325 aaKnown RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 FOLH1Q04609 750 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 GALNT1Q10472 559 aaPredicted RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 TBL3Q12788 808 aaKnown RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 STX4Q12846 297 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 ZNF169Q14929 603 aaPredicted RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 ZNF468Q5VIY5 522 aaPredicted RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 CYP20A1Q6UW02 462 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 C16orf47Q6ZP98 133 aaPredicted RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 NUDT13Q86X67 352 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 B3GNT7Q8NFL0 401 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 OR1N1Q8NGS0 311 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 METTL6Q8TCB7 284 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 PTPMT1Q8WUK0 201 aaPredicted RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 SIGLEC12Q96PQ1 595 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 FAM111AQ96PZ2 611 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 MECRQ9BV79 373 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 ACBD3Q9H3P7 528 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 RPF2Q9H7B2 306 aaKnown RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 ADAP2Q9NPF8 381 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 OXSMQ9NWU1 459 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 PPT2Q9UMR5 302 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 SNX6Q9UNH7 406 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 PLLPQ9Y342 182 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 DYTNA2CJ06 578 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 RGS16O15492 202 aaPredicted RBP17.47■□□□□ 0.39
GMDS-208ENST00000530927 SEMA3DO95025 777 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 MLYCDO95822 493 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 MYZAPP0CAP1 466 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 SERPINB3P29508 390 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 TNFSF10P50591 281 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 GPR143P51810 404 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 RCN2Q14257 317 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 FRMD7Q6ZUT3 714 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 COMMD6Q7Z4G1 85 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 METTL4Q8N3J2 472 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 HAS2Q92819 552 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 PGM2Q96G03 612 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 HES7Q9BYE0 225 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.47■□□□□ 0.391e-7■■■■□ 22.8
GMDS-208ENST00000530927 ZNF446Q9NWS9 450 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 VTI1BQ9UEU0 232 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 SPACA6W5XKT8 324 aa17.47■□□□□ 0.39
GMDS-208ENST00000530927 NBASA2RRP1 2371 aa17.46■□□□□ 0.39
GMDS-208ENST00000530927 HRKO00198 91 aa17.46■□□□□ 0.39
GMDS-208ENST00000530927 PGRMC2O15173 223 aa17.46■□□□□ 0.39
GMDS-208ENST00000530927 ATP8B1O43520 1251 aa17.46■□□□□ 0.39
GMDS-208ENST00000530927 ESRRBO95718 433 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms