RNA–Protein interactions for RNA: ENST00000529540.5

NR1H3-231, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 1,673 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-231	ENST00000529540	SEMA4G	Q9NTN9	838 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	DCAF13	Q9NV06	445 aa	Known RBP	13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	DNAJC11	Q9NVH1	559 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	CCL27	Q9Y4X3	112 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	KCNE2	Q9Y6J6	123 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	PI4KA	P42356	2102 aa		13.9	□□□□□ -0.18
NR1H3-231	ENST00000529540	TRBV5-3	A0A0A0MS03	114 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	RHPN2P1	A8MT19	583 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	PROB1	E7EW31	1015 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	OR7A17	O14581	309 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	GNGT2	O14610	69 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	BCKDK	O14874	412 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	TAPBP	O15533	448 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	WDR47	O94967	919 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	CCNDBP1	O95273	360 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	HSPA7	P48741	367 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	IST1	P53990	364 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	TBPL1	P62380	186 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	PIGF	Q07326	219 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	NAE1	Q13564	534 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	NR0B2	Q15466	257 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	AP5B1	Q2VPB7	878 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	CCSMST1	Q4G0I0	132 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	SPESP1	Q6UW49	350 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	MBOAT1	Q6ZNC8	495 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	GOLGA7	Q7Z5G4	137 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	BTLA	Q7Z6A9	289 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	MSRB3	Q8IXL7	192 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	PATE1	Q8WXA2	126 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	EFHD2	Q96C19	240 aa	Predicted RBP	13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	MED8	Q96G25	268 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	SGPP1	Q9BX95	441 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	IL21R	Q9HBE5	538 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	ICK	Q9UPZ9	632 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	EIF3L	Q9Y262	564 aa	Known RBP	13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	ORC6	Q9Y5N6	252 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	GPC6	Q9Y625	555 aa	Predicted RBP	13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	TMEM131	Q92545	1883 aa		13.89	□□□□□ -0.19
NR1H3-231	ENST00000529540	TRBV23OR9-2	A0A075B6M9	112 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	HS6ST1	O60243	411 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	UGDH	O60701	494 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	PRKD3	O94806	890 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	OTC	P00480	354 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	GIMD1	P0DJR0	217 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	MVK	Q03426	396 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	EMX1	Q04741	257 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	GTF2H2	Q13888	395 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	KEAP1	Q14145	624 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	KIR2DS3	Q14952	304 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	SYT6	Q5T7P8	510 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	GTF2H2C	Q6P1K8	395 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	LCTL	Q6UWM7	567 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	DBX2	Q6ZNG2	339 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	THOC6	Q86W42	341 aa	Known RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	OOSP2	Q86WS3	158 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	GATAD2A	Q86YP4	633 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	CADM3	Q8N126	398 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	OR4F6	Q8NGB9	312 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	DYNC2LI1	Q8TCX1	351 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	ZFP90	Q8TF47	636 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	RORB	Q92753	470 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	ZNF300	Q96RE9	604 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	EDEM2	Q9BV94	578 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	BTBD2	Q9BX70	525 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	ATG10	Q9H0Y0	220 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	DUSP21	Q9H596	190 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	TMEM9B	Q9NQ34	198 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	TPRKB	Q9Y3C4	175 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	DYRK1B	Q9Y463	629 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	PCDHB11	Q9Y5F2	797 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	SLC28A1	O00337	649 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	IL6	P05231	212 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	BMP4	P12644	408 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	MAGEA2	P43356	314 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	GZMM	P51124	257 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	HNRNPF	P52597	415 aa	Known RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	MAZ	P56270	477 aa	Known RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	GPLD1	P80108	840 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	ABAT	P80404	500 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	IFITM3	Q01628	133 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	SPEM2	Q0P670	501 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	CDC20	Q12834	499 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	TRAF3	Q13114	568 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	HIST2H2AC	Q16777	129 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	PRAMEF13	Q5VWM6	474 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	TCEAL6	Q6IPX3	200 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	ARMC6	Q6NXE6	501 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	TMEM53	Q6P2H8	277 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	SHQ1	Q6PI26	577 aa	Known RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	PLEKHG7	Q6ZR37	379 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	ZNF438	Q7Z4V0	828 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	TMEM179B	Q7Z7N9	219 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	LACC1	Q8IV20	430 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	SLC35F3	Q8IY50	421 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	LRRC56	Q8IYG6	542 aa	Predicted RBP	13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	HS3ST5	Q8IZT8	346 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	SVOP	Q8N4V2	548 aa		13.88	□□□□□ -0.19
NR1H3-231	ENST00000529540	OR10A6	Q8NH74	314 aa		13.88	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms