RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 VMP1Q96GC9 406 aa19.52■□□□□ 0.72
TRAPPC9-215ENST00000524162 TMEM109Q9BVC6 243 aa19.52■□□□□ 0.72
TRAPPC9-215ENST00000524162 ALOXE3Q9BYJ1 711 aa19.52■□□□□ 0.72
TRAPPC9-215ENST00000524162 MID2Q9UJV3 735 aa19.52■□□□□ 0.72
TRAPPC9-215ENST00000524162 RAB21Q9UL25 225 aa19.52■□□□□ 0.72
TRAPPC9-215ENST00000524162 ASB4Q9Y574 426 aa19.52■□□□□ 0.72
TRAPPC9-215ENST00000524162 SPTBN1Q01082 2364 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-215ENST00000524162 COL12A1Q99715 3063 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 A8MUI8 341 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 SAP18O00422 153 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 PLIN3O60664 434 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 KRT6AP02538 564 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 KRT6BP04259 564 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 ENO1P06733 434 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 KRT4P19013 534 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 KRT6CP48668 564 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 METTL4Q8N3J2 472 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 OR8K3Q8NH51 312 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 SUN3Q8TAQ9 357 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 ANKRD9Q96BM1 317 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 CNDP1Q96KN2 507 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 NPAS2Q99743 824 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 RPF2Q9H7B2 306 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 PRM3Q9NNZ6 103 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 CLCA3PQ9Y6N3 262 aa19.51■□□□□ 0.71
TRAPPC9-215ENST00000524162 USP9YO00507 2555 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 DOPEY2Q9Y3R5 2298 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 A0A1B0GTL3 188 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 SERTM1A2A2V5 107 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 CCDC151A5D8V7 595 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 PPP6CO00743 305 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 COPEO14579 308 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 MYO1DO94832 1006 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 FAM58BPP0C7Q3 252 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 MYL2P10916 166 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 GALNSP34059 522 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 TRHRP34981 398 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 CSTF3Q12996 717 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 CYP20A1Q6UW02 462 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 GPRIN3Q6ZVF9 776 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 BEST3Q8N1M1 668 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 CISD2Q8N5K1 135 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 HORMAD2Q8N7B1 307 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 GBP7Q8N8V2 638 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 CATSPER1Q8NEC5 780 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 OR1N1Q8NGS0 311 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 PELOQ9BRX2 385 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 WDR41Q9HAD4 459 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 ASF1BQ9NVP2 202 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 LUZP4Q9P127 313 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 FBXW2Q9UKT8 454 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 ATG4BQ9Y4P1 393 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 CROCCQ5TZA2 2017 aa19.5■□□□□ 0.71
TRAPPC9-215ENST00000524162 PRAMEF2O60811 474 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 SH3BGRLO75368 114 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 EEDO75530 441 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 OR4F21O95013 312 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 ESRRBO95718 433 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 STT3AP46977 705 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 HNRNPH2P55795 449 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 MLF1P58340 268 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 TUBA3CQ13748 450 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 ERCC6LQ2NKX8 1250 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 TUBA3EQ6PEY2 450 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 RPS27LQ71UM5 84 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 TRABD2AQ86V40 505 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 MDS2Q8NDY4 140 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 PTPMT1Q8WUK0 201 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 FAR1Q8WVX9 515 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 SELENOMQ8WWX9 145 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 UTP23Q9BRU9 249 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 SORBS1Q9BX66 1292 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 PARD6BQ9BYG5 372 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 DEFB126Q9BYW3 111 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP19.49■□□□□ 0.711e-7■■■■■ 27.2
TRAPPC9-215ENST00000524162 GSTO2Q9H4Y5 243 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 PNO1Q9NRX1 252 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 OXSMQ9NWU1 459 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 PLA2G3Q9NZ20 509 aa19.49■□□□□ 0.71
TRAPPC9-215ENST00000524162 PYCARD-AS1I3L0S3 204 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 FCHO1O14526 889 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 TMPRSS11DO60235 418 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 GUCY1B2O75343 617 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 ULK1O75385 1050 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 PDYNP01213 254 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 COX7A2P14406 83 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 IFFO1Q0D2I5 559 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 PRR30Q53SZ7 412 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 ST13P4Q8IZP2 240 aaPredicted RBP19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 DNAJB8Q8NHS0 232 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 VPS29Q9UBQ0 182 aa19.48■□□□□ 0.71
TRAPPC9-215ENST00000524162 SETXQ7Z333 2677 aaKnown RBP19.47■□□□□ 0.71
TRAPPC9-215ENST00000524162 A0A1W2PR48 441 aa19.47■□□□□ 0.71
TRAPPC9-215ENST00000524162 SMIM23A6NLE4 172 aa19.47■□□□□ 0.71
TRAPPC9-215ENST00000524162 TCP11X1B4DZS4 312 aa19.47■□□□□ 0.71
TRAPPC9-215ENST00000524162 MANBAO00462 879 aa19.47■□□□□ 0.71
TRAPPC9-215ENST00000524162 LDB3O75112 727 aa19.47■□□□□ 0.71
TRAPPC9-215ENST00000524162 ZFAND5O76080 213 aa19.47■□□□□ 0.71
TRAPPC9-215ENST00000524162 CBX6O95503 412 aa19.47■□□□□ 0.71
TRAPPC9-215ENST00000524162 GPR75O95800 540 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms