RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 FRMD6Q96NE9 622 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 MRPL57Q9BQC6 102 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 CCDC77Q9BR77 488 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 CENPKQ9BS16 269 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 NTMT1Q9BV86 223 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 SORBS1Q9BX66 1292 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 ZNF717Q9BY31 904 aaPredicted RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 NOL11Q9H8H0 719 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 XPR1Q9UBH6 696 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 PPT2Q9UMR5 302 aa15.88■□□□□ 0.13
SQLE-205ENST00000521232 YARS2Q9Y2Z4 477 aaKnown RBP15.88■□□□□ 0.13
SQLE-205ENST00000521232 NOTCH2Q04721 2471 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 ITPR2Q14571 2701 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 PCNX1Q96RV3 2341 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 MYOCOSA0A1B0GUC4 107 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 PRKNO60260 465 aaPredicted RBP15.87■□□□□ 0.13
SQLE-205ENST00000521232 SMIM24O75264 130 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 ITGA10O75578 1167 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 GCAP28676 217 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 RAP1GDS1P52306 607 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 IGLV3-21P80748 117 aaPredicted RBP15.87■□□□□ 0.13
SQLE-205ENST00000521232 ALDH6A1Q02252 535 aaKnown RBP15.87■□□□□ 0.13
SQLE-205ENST00000521232 ZRSR2Q15696 482 aaKnown RBP15.87■□□□□ 0.13
SQLE-205ENST00000521232 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.87■□□□□ 0.133e-7■□□□□ 10
SQLE-205ENST00000521232 ADGRD1Q6QNK2 874 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 TIFABQ6ZNK6 161 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 GPR180Q86V85 440 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 FJX1Q86VR8 437 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 OR52B6Q8NGF0 335 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 TMEM125Q96AQ2 219 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 SCYL1Q96KG9 808 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 DDX31Q9H8H2 851 aaKnown RBP15.87■□□□□ 0.13
SQLE-205ENST00000521232 ZBTB26Q9HCK0 441 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 PCTPQ9UKL6 214 aa15.87■□□□□ 0.13
SQLE-205ENST00000521232 TEX15Q9BXT5 2789 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 CROCCQ5TZA2 2017 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 EXOC1LA0A1B0GW35 172 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 C17orf105B2RV13 164 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 RIPK2O43353 540 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 PROM1O43490 865 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 ETHE1O95571 254 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 MLYCDO95822 493 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 SBK3P0C264 359 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 TNNI3P19429 210 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 BSGP35613 385 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 NEK2P51955 445 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 CCNG1P51959 295 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 RBPJQ06330 500 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 C1QL3Q5VWW1 255 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 MRM1Q6IN84 353 aaKnown RBP15.86■□□□□ 0.13
SQLE-205ENST00000521232 HSDL2Q6YN16 418 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 SIAH3Q8IW03 269 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 TMEM156Q8N614 296 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 OR8K3Q8NH51 312 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 TANKQ92844 425 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 ATP6V1E2Q96A05 226 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 GPR137Q96N19 417 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 CDK15Q96Q40 435 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 MRPL46Q9H2W6 279 aaKnown RBP15.86■□□□□ 0.13
SQLE-205ENST00000521232 RPF2Q9H7B2 306 aaKnown RBP15.86■□□□□ 0.13
SQLE-205ENST00000521232 MYOTQ9UBF9 498 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 PHF11Q9UIL8 331 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 ATG4BQ9Y4P1 393 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 ASB4Q9Y574 426 aa15.86■□□□□ 0.13
SQLE-205ENST00000521232 FGF17O60258 216 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 TLX1P31314 330 aaPredicted RBP15.85■□□□□ 0.13
SQLE-205ENST00000521232 STT3AP46977 705 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 SSR4P51571 173 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 HNRNPH2P55795 449 aaKnown RBP15.85■□□□□ 0.13
SQLE-205ENST00000521232 TNFRSF17Q02223 184 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 ID2Q02363 134 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 C10orf62Q5T681 223 aaPredicted RBP15.85■□□□□ 0.13
SQLE-205ENST00000521232 C18orf63Q68DL7 685 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 OR4N5Q8IXE1 308 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 ZNF321PQ8N8H1 164 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 SLC2A12Q8TD20 617 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 TRIM44Q96DX7 344 aaPredicted RBP15.85■□□□□ 0.13
SQLE-205ENST00000521232 MTBPQ96DY7 904 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 NSUN5Q96P11 429 aaKnown RBP15.85■□□□□ 0.13
SQLE-205ENST00000521232 C1QTNF3Q9BXJ4 246 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 TXLNGYQ9BZA5 131 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 OR8D2Q9GZM6 311 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 ZNF835Q9Y2P0 537 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 KLF13Q9Y2Y9 288 aaPredicted RBP15.85■□□□□ 0.13
SQLE-205ENST00000521232 CACNA1DQ01668 2161 aa15.85■□□□□ 0.13
SQLE-205ENST00000521232 A0A0A6YYD5 115 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 TRGV8A0A0C4DH27 118 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 NPIPA5E9PKD4 350 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 KLRC4-KLRK1H3BQV0 150 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 ZG16O60844 167 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 EEDO75530 441 aaKnown RBP15.84■□□□□ 0.13
SQLE-205ENST00000521232 OR2J2O76002 312 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 RPS17P08708 135 aaKnown RBP15.84■□□□□ 0.13
SQLE-205ENST00000521232 FAM153BP0C7A2 387 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 RHOXF2BP0C7M4 288 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 CA7P43166 264 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 RNF4P78317 190 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 TRAF3Q13114 568 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 FAM153CQ494X1 144 aa15.84■□□□□ 0.13
SQLE-205ENST00000521232 GGTA1PQ4G0N0 100 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms