RNA–Protein interactions for RNA: ENST00000517625.5

SKP1-203, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 3 BASIC

Gene SKP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-203ENST00000517625 THAP10Q9P2Z0 257 aaPredicted RBP2.49□□□□□ -2.01
SKP1-203ENST00000517625 CIDEBQ9UHD4 219 aa2.49□□□□□ -2.01
SKP1-203ENST00000517625 TSPAN16Q9UKR8 245 aa2.49□□□□□ -2.01
SKP1-203ENST00000517625 SPATA2Q9UM82 520 aa2.49□□□□□ -2.01
SKP1-203ENST00000517625 EXOC7Q9UPT5 735 aa2.49□□□□□ -2.01
SKP1-203ENST00000517625 EXOC6BQ9Y2D4 811 aa2.49□□□□□ -2.01
SKP1-203ENST00000517625 COL5A2P05997 1499 aaPredicted RBP2.48□□□□□ -2.01
SKP1-203ENST00000517625 SMIM30A4D0T7 59 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 SRRM4A7MD48 611 aaKnown RBP2.48□□□□□ -2.01
SKP1-203ENST00000517625 PDHXO00330 501 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 FBP2O00757 339 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 SORBS2O94875 1100 aaKnown RBP2.48□□□□□ -2.01
SKP1-203ENST00000517625 STBD1O95210 358 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 POP4O95707 220 aaKnown RBP2.48□□□□□ -2.01
SKP1-203ENST00000517625 CPNE6O95741 557 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 OLFM2O95897 454 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 APRTP07741 180 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 LYNP07948 512 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 LMO2P25791 158 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 OXTRP30559 389 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 PGFP49763 221 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 NME5P56597 212 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 BTG1P62324 171 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 FCHO2Q0JRZ9 810 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 KNOP1Q1ED39 458 aaKnown RBP2.48□□□□□ -2.01
SKP1-203ENST00000517625 MPPE1Q53F39 396 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 SNX32Q86XE0 403 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 LMNTD2Q8IXW0 634 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 FBXW8Q8N3Y1 598 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 RTL3Q8N8U3 475 aaKnown RBP2.48□□□□□ -2.01
SKP1-203ENST00000517625 COLGALT1Q8NBJ5 622 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 ICA1LQ8NDH6 482 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 OR1B1Q8NGR6 318 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 GPR148Q8TDV2 347 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 TAF15Q92804 592 aaKnown RBP eCLIP2.48□□□□□ -2.01
SKP1-203ENST00000517625 ATP6V0A1Q93050 837 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 SLCO4A1Q96BD0 722 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 ANKRD27Q96NW4 1050 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 ATOH8Q96SQ7 321 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 ATP6V0BQ99437 205 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 AGPAT1Q99943 283 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 C19orf43Q9BQ61 176 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 DCTN5Q9BTE1 182 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 WWP1Q9H0M0 922 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 TRPV6Q9H1D0 765 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 IL1RAPQ9NPH3 570 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 CYP39A1Q9NYL5 469 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 PAK5Q9P286 719 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 TRIM10Q9UDY6 481 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 APPL1Q9UKG1 709 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 RARRES3Q9UL19 164 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 KNSTRNQ9Y448 316 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 SNX5Q9Y5X3 404 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 AUP1Q9Y679 476 aa2.48□□□□□ -2.01
SKP1-203ENST00000517625 OR5H15A6NDH6 313 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 K7EQG2 157 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 OGTO15294 1046 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 PSMD3O43242 534 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 FRAT2O75474 233 aaPredicted RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 OR6A2O95222 327 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 IGHV3-13P01766 116 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 FHP07954 510 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 CD1DP15813 335 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 SELEP16581 610 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 GJB2P29033 226 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 PRELPP51888 382 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 ADARP55265 1226 aaKnown RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 UCP2P55851 309 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 SSTP61278 116 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 IRX6P78412 446 aaPredicted RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 CCZ1BP86790 482 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 CCZ1P86791 482 aaPredicted RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 ACTN3Q08043 901 aaPredicted RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 LPAL2Q16609 132 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 HAGHQ16775 308 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 SHROOM1Q2M3G4 852 aaPredicted RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 SNAI3Q3KNW1 292 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 VWA2Q5GFL6 755 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 LIPJQ5W064 366 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 ETFRF1Q6IPR1 90 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 NEPROQ6NW34 567 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 ZNF730Q6ZMV8 503 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 MCM10Q7L590 875 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 SLC47A2Q86VL8 602 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 STHQ8IWL8 128 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 LYG1Q8N1E2 194 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 ABHD12Q8N2K0 398 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 BANPQ8N9N5 519 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 U2AF1L4Q8WU68 220 aaKnown RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 CHPT1Q8WUD6 406 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 UBTD2Q8WUN7 234 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 PCNPQ8WW12 178 aaKnown RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 KRT35Q92764 455 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 NABP1Q96AH0 204 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 ZNF597Q96LX8 424 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 HEXA-AS1Q9H8Q6 139 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 WDR41Q9HAD4 459 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 PLEKHA3Q9HB20 300 aa2.47□□□□□ -2.01
SKP1-203ENST00000517625 ZCCHC3Q9NUD5 404 aaKnown RBP2.47□□□□□ -2.01
SKP1-203ENST00000517625 AKAP7Q9P0M2 348 aaPredicted RBP2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 234.2 ms