RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 LY6G5BQ8NDX9 201 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 OR11H4Q8NGC9 324 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 RTN4IP1Q8WWV3 396 aaPredicted RBP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 MSLNLQ96KJ4 702 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 SMIM14Q96QK8 99 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 IL4I1Q96RQ9 567 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 FRMD8P1Q9BZ68 369 aaPredicted RBP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 MIS12Q9H081 205 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 TNMDQ9H2S6 317 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 NARFLQ9H6Q4 476 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 DCLRE1BQ9H816 532 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 SLC28A3Q9HAS3 691 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 FBXO8Q9NRD0 319 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 ABCC13Q9NSE7 274 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 SNTG1Q9NSN8 517 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 ZNF701Q9NV72 531 aaPredicted RBP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 MARCH5Q9NX47 278 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 SPHK1Q9NYA1 384 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 MPP6Q9NZW5 540 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 NUFIP1Q9UHK0 495 aaKnown RBP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 DDX52Q9Y2R4 599 aaKnown RBP eCLIP-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 U3KQA8 63 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 KIAA1549Q9HCM3 1950 aa-1.73□□□□□ -2.69
SNORA40.16-201ENST00000517238 COL6A3P12111 3177 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 FAM90A7PA6NKC0 464 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TMEM110-MUSTN1A8MSY1 372 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 FAM90A22PA8MWA6 464 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 FAM90A12PA8MX19 464 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 H3BML4 177 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 H7C417 338 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 J3QR06 171 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 LAD1O00515 517 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TAPBPO15533 448 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 FRS3O43559 492 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 PIP5K1CO60331 668 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 RNASEH1O60930 286 aaKnown RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 F9P00740 461 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TFP02787 698 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 ATP1B1P05026 303 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 HOXB8P17481 243 aaPredicted RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 PGAM1P18669 254 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 RPL9P32969 192 aaKnown RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 SLC1A6P48664 564 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TPMTP51580 245 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 ZNF140P52738 457 aaPredicted RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 GSTO1P78417 241 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 BCL2L1Q07817 233 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 ACSM1Q08AH1 577 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 SRSF9Q13242 221 aaKnown RBP eCLIP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 IL18R1Q13478 541 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 HIST2H2ACQ16777 129 aaPredicted RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 ODF4Q2M2E3 257 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 FAM106AQ4KMX7 169 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 PAGE3Q5JUK9 113 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TMEM136Q6ZRR5 245 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 STRADAQ7RTN6 431 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TRMT11Q7Z4G4 463 aaKnown RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 SLFN11Q7Z7L1 901 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TMEM110Q86TL2 294 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 SNX32Q86XE0 403 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 DZIP1Q86YF9 867 aaKnown RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 EGFL6Q8IUX8 553 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 PGAM4Q8N0Y7 254 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 ARL14Q8N4G2 192 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TSPYL6Q8N831 410 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TAF4BQ92750 862 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 HGDQ93099 445 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 MTERF3Q96E29 417 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 ZNF317Q96PQ6 595 aaPredicted RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 OR2M2Q96R28 347 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TMEM47Q9BQJ4 181 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TXNDC17Q9BRA2 123 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 POLR3GLQ9BT43 218 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TIMM21Q9BVV7 248 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 LINC00574Q9H8X3 128 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 EXOSC3Q9NQT5 275 aaKnown RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 RGL1Q9NZL6 768 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 SLC12A6Q9UHW9 1150 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 ZNF222Q9UK12 451 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 ELF5Q9UKW6 265 aaPredicted RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 NIP7Q9Y221 180 aaKnown RBP eCLIP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 FOXA2Q9Y261 457 aaPredicted RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 MAN2B2Q9Y2E5 1009 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 TMEM184BQ9Y519 407 aaPredicted RBP-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 SPACA6W5XKT8 324 aa-1.74□□□□□ -2.69
SNORA40.16-201ENST00000517238 MYH14Q7Z406 1995 aaKnown RBP-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 F8W8V4 182 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 OR7A17O14581 309 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 RBFOX2O43251 390 aaKnown RBP eCLIP-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 PLPP2O43688 288 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 FRAT2O75474 233 aaPredicted RBP-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 ERAL1O75616 437 aaKnown RBP-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 MBD4O95243 580 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 SEMG1P04279 462 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 PSMC3P17980 439 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 CCND1P24385 295 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 SLC6A6P31641 620 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 PNPLA4P41247 253 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 POU3F4P49335 361 aa-1.75□□□□□ -2.69
SNORA40.16-201ENST00000517238 PPM1FP49593 454 aaPredicted RBP-1.75□□□□□ -2.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms