RNA–Protein interactions for RNA: ENST00000516601.1

RNU5B-3P-201, Transcript of RNA, U5B small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU5B-3P, Length 115 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU5B-3P-201ENST00000516601 GANQ9H2C0 597 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZNF556Q9HAH1 456 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 SDF2L1Q9HCN8 221 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZNF334Q9HCZ1 680 aaPredicted RBP2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 HPS4Q9NQG7 708 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZNF71Q9NQZ8 489 aaPredicted RBP2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 GDF3Q9NR23 364 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 POLE3Q9NRF9 147 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 SLC35D1Q9NTN3 355 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 EXOC1Q9NV70 894 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 TECRQ9NZ01 308 aaKnown RBP2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 TMOD2Q9NZR1 351 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZNF319Q9P2F9 582 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ANKMY1Q9P2S6 941 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 TBK1Q9UHD2 729 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 KLHDC2Q9Y2U9 406 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 MMP24Q9Y5R2 645 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZMYM6O95789 1325 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 PTPRUQ92729 1446 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 CUX2O14529 1486 aa2.3□□□□□ -2.04
RNU5B-3P-201ENST00000516601 SSX5O60225 188 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 AP2A2O94973 939 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 SYNGR4O95473 234 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 APBB3O95704 486 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 AK1P00568 194 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 IGLV2-11P01706 119 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 VTNP04004 478 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 SFTPBP07988 381 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 HMBSP08397 361 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 TSPY4P0CV99 314 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 TSPY10P0CW01 314 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 PRSS56P0CW18 603 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 HSPA5P11021 654 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 KRT13P13646 458 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ANPEPP15144 967 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 CYP11B1P15538 503 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 AADACP22760 399 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 GLRA1P23415 457 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 CYP2F1P24903 491 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 PPP2R1AP30153 589 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 CCND2P30279 289 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 HLA-FP30511 346 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 TIMP3P35625 211 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 MDH1P40925 334 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ID1P41134 155 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ACADSBP45954 432 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 CCR4P51679 360 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 GEMP55040 296 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 RAG2P55895 527 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 DLX5P56178 289 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 RAPSNQ13702 412 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 EXOSC7Q15024 291 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZRSR1Q15695 479 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZKSCAN8Q15776 578 aaPredicted RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 AGKQ53H12 422 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 FASTKD1Q53R41 847 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 SPANXN4Q5MJ08 99 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ATP1A1-AS1Q5TC04 95 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 RTL6Q6ICC9 239 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 SULT1C3Q6IMI6 304 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 MEX3BQ6ZN04 569 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ARMCX2Q7L311 632 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 YRDCQ86U90 279 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZNF444Q8N0Y2 327 aaPredicted RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 CCDC185Q8N715 623 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 RNF148Q8N7C7 305 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 NIPA2Q8N8Q9 360 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 MINDY2Q8NBR6 621 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 OR56B1Q8NGI3 324 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ATP8B4Q8TF62 1192 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 SMAP2Q8WU79 429 aaPredicted RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 P3H4Q92791 437 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 TMEM45BQ96B21 275 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 DTNBP1Q96EV8 351 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 C14orf79Q96F83 325 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 RPGRIP1Q96KN7 1286 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 PCDHB18PQ96TA0 734 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 EPYCQ99645 322 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 CBWD1Q9BRT8 395 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 THUMPD2Q9BTF0 503 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 PAPOLGQ9BWT3 736 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 NUSAP1Q9BXS6 441 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ATG10Q9H0Y0 220 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 MMP28Q9H239 520 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 FNDC4Q9H6D8 234 aaPredicted RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 TMEM231Q9H6L2 316 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ECT2Q9H8V3 914 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 VIPAS39Q9H9C1 493 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 YAE1D1Q9NRH1 226 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 HOMER3Q9NSC5 361 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ACOXLQ9NUZ1 547 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 GTSE1Q9NYZ3 720 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 ZNF624Q9P2J8 865 aaPredicted RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 CHRNA9Q9UGM1 479 aa2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 MRTO4Q9UKD2 239 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 DIMT1Q9UNQ2 313 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 MRPS2Q9Y399 296 aaKnown RBP2.29□□□□□ -2.04
RNU5B-3P-201ENST00000516601 UMODL1Q5DID0 1318 aa2.28□□□□□ -2.04
RNU5B-3P-201ENST00000516601 IGHV4-4A0A075B6R2 117 aa2.28□□□□□ -2.04
RNU5B-3P-201ENST00000516601 A0A0G2JLW4 131 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 323.1 ms