RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 DNASE1L3Q13609 305 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 RPS6KA2Q15349 733 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 SLC48A1Q6P1K1 146 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 QSOX2Q6ZRP7 698 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 RIMKLAQ8IXN7 391 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 IL22RA1Q8N6P7 574 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 ENDOVQ8N8Q3 282 aaKnown RBP19.75■□□□□ 0.75
LSM6-207ENST00000515311 TMEM52Q8NDY8 209 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 FGF11Q92914 225 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 MARK4Q96L34 752 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 ACTL8Q9H568 366 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 ZNF385DQ9H6B1 395 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 REEP4Q9H6H4 257 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 HEY2Q9UBP5 337 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 EXO1Q9UQ84 846 aaKnown RBP19.75■□□□□ 0.75
LSM6-207ENST00000515311 PCDHGA6Q9Y5G7 932 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 SCN2AQ99250 2005 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 CCDC88CQ9P219 2028 aa19.75■□□□□ 0.75
LSM6-207ENST00000515311 TBX19O60806 448 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 B4GALT2O60909 372 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 CTNSO60931 367 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 JRKO75564 520 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 PRKRAO75569 313 aaKnown RBP19.74■□□□□ 0.75
LSM6-207ENST00000515311 KLF7O75840 302 aaPredicted RBP19.74■□□□□ 0.75
LSM6-207ENST00000515311 FURINP09958 794 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 NCF2P19878 526 aaPredicted RBP19.74■□□□□ 0.75
LSM6-207ENST00000515311 DLSTP36957 453 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 RPS15P62841 145 aaKnown RBP19.74■□□□□ 0.75
LSM6-207ENST00000515311 MC1RQ01726 317 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 RHAGQ02094 409 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 PDE7AQ13946 482 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 ERV3-1Q14264 604 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 RIPOR1Q6ZS17 1223 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 R3HCC1LQ7Z5L2 792 aaKnown RBP19.74■□□□□ 0.75
LSM6-207ENST00000515311 SCUBE1Q8IWY4 988 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 MMP21Q8N119 569 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 MIER2Q8N344 545 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 OR2Y1Q8NGV0 311 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 SNIP1Q8TAD8 396 aaKnown RBP19.74■□□□□ 0.75
LSM6-207ENST00000515311 DNAJB14Q8TBM8 379 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 GATA6Q92908 595 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 DPY30Q9C005 99 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 MIEF1Q9NQG6 463 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 TMEM45AQ9NWC5 275 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 TAS2R7Q9NYW3 318 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 ZIM2Q9NZV7 527 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 KCND3Q9UK17 655 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 CES1P1Q9UKY3 287 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 PSME2Q9UL46 239 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 ARL2BPQ9Y2Y0 163 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 COPG1Q9Y678 874 aaKnown RBP19.74■□□□□ 0.75
LSM6-207ENST00000515311 NCOR2Q9Y618 2525 aa19.74■□□□□ 0.75
LSM6-207ENST00000515311 LOC101059948A0A1B0GTJ6 334 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 SYNDIG1LA6NDD5 238 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 SCAMP2O15127 329 aaKnown RBP19.73■□□□□ 0.75
LSM6-207ENST00000515311 PGRMC2O15173 223 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 CDC123O75794 336 aaPredicted RBP19.73■□□□□ 0.75
LSM6-207ENST00000515311 DDX5P17844 614 aaKnown RBP19.73■□□□□ 0.75
LSM6-207ENST00000515311 PTPN4P29074 926 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 ALDH9A1P49189 494 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 CLNS1AP54105 237 aaKnown RBP19.73■□□□□ 0.75
LSM6-207ENST00000515311 SQLEQ14534 574 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 MINDY4Q4G0A6 757 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 LAPTM4BQ86VI4 370 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 C7orf57Q8NEG2 295 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 KIAA1143Q96AT1 154 aaPredicted RBP19.73■□□□□ 0.75
LSM6-207ENST00000515311 VN1R1Q9GZP7 353 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 PRTFDC1Q9NRG1 225 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 ATP6V1HQ9UI12 483 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 TCFL5Q9UL49 500 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 MKL2Q9ULH7 1088 aa19.73■□□□□ 0.75
LSM6-207ENST00000515311 G3BP2Q9UN86 482 aaKnown RBP19.73■□□□□ 0.75
LSM6-207ENST00000515311 FARSAQ9Y285 508 aaKnown RBP19.73■□□□□ 0.75
LSM6-207ENST00000515311 GLOD5A6NK44 160 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 IDSB3KWA1 339 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 NDUFAB1O14561 156 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 AKAP10O43572 662 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 LRATO95237 230 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 RECKO95980 971 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 GPX3P22352 226 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 FOLR3P41439 243 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 UFM1P61960 85 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 ACTN3Q08043 901 aaPredicted RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 SLC13A2Q13183 592 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 CLN3Q13286 438 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 DPY19L1Q2PZI1 675 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 MFSD4BQ5TF39 518 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 CROCCQ5TZA2 2017 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 CAMKMTQ7Z624 323 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 CPSF7Q8N684 471 aaKnown RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 KRTCAP2Q8N6L1 136 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 ANKS4BQ8N8V4 417 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 GLB1L3Q8NCI6 653 aaPredicted RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 ZNF248Q8NDW4 579 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 PLPP5Q8NEB5 264 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 BCAS4Q8TDM0 211 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 GFM2Q969S9 779 aaKnown RBP19.72■□□□□ 0.75
LSM6-207ENST00000515311 TESCQ96BS2 214 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 PPCDCQ96CD2 204 aa19.72■□□□□ 0.75
LSM6-207ENST00000515311 ZBTB18Q99592 522 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms