RNA–Protein interactions for RNA: ENST00000505315.1

HMGB1P22-201, Transcript of high mobility group box 1 pseudogene 22, humanhuman

BASIC

Gene HMGB1P22, Length 124 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P22-201ENST00000505315 NDUFB10O96000 172 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 MBP02144 154 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 VTNP04004 478 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 LYNP07948 512 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 GSTA1P08263 222 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 MED14OSP0DP75 135 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ERVK-10P10266 1014 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 GP9P14770 177 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 NCK1P16333 377 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 NAGAP17050 411 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 PTNP21246 168 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 PRKACBP22694 351 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 LHCGRP22888 699 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CSTF2P33240 577 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 DUTP33316 252 aaKnown RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CYLC1P35663 651 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ALDH3B1P43353 468 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 MAGEA8P43361 318 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 NPY2RP49146 381 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC11A1P49279 550 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ACADVLP49748 655 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 TPMTP51580 245 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CLDN17P56750 224 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ISL1P61371 349 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 SEC61A1P61619 476 aaKnown RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 RPS15P62841 145 aaKnown RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ABATP80404 500 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CSTF1Q05048 431 aaKnown RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 LIPEQ05469 1076 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF91Q05481 1191 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 GABPAQ06546 454 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 MERTKQ12866 999 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ITGA9Q13797 1035 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CEACAM7Q14002 265 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 PCK2Q16822 640 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 DCAF4L1Q3SXM0 396 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 WLSQ5T9L3 541 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 RAET1LQ5VY80 246 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 SUMO4Q6EEV6 95 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CAPN13Q6MZZ7 669 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC27A4Q6P1M0 643 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 FAM122CQ6P4D5 195 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ERICH5Q6P6B1 374 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CORO6Q6QEF8 472 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CEACAM20Q6UY09 585 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 PACS1Q6VY07 963 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF841Q6ZN19 808 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 Q6ZTK2 550 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 KCTD8Q6ZWB6 473 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 GOLGA7Q7Z5G4 137 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CPEB2Q7Z5Q1 589 aaKnown RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ACOT1Q86TX2 421 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 VPS36Q86VN1 386 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 SLC22A16Q86VW1 577 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 TGIF2LXQ8IUE1 241 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CCDC36Q8IYA8 594 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 EID3Q8N140 333 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 LRRC75A-AS1Q8N1F1 130 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CENPSQ8N2Z9 138 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 DNAJC22Q8N4W6 341 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CEP112Q8N8E3 955 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 LRTM2Q8N967 370 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 OR13C5Q8NGS8 318 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 FGFBP3Q8TAT2 258 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 SPRYD4Q8WW59 207 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 EDAQ92838 391 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 RPL3LQ92901 407 aaKnown RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 HAVCR1Q96D42 359 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 MTBPQ96DY7 904 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 IGSF21Q96ID5 467 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 AKR1E2Q96JD6 320 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 AMDHD1Q96NU7 426 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 BBC3Q96PG8 261 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 PANX2Q96RD6 677 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 NPY6RQ99463 290 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 NDUFAF3Q9BU61 184 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ROGDIQ9GZN7 287 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 BLZF1Q9H2G9 400 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 CYP3A43Q9HB55 503 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF160Q9HCG1 818 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 RAB18Q9NP72 206 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 PDP1Q9P0J1 537 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF319Q9P2F9 582 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 DBF4Q9UBU7 674 aaPredicted RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 ZNF346Q9UL40 294 aaKnown RBP3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 RPH3ALQ9UNE2 315 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 AMDHD2Q9Y303 409 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 WDR45Q9Y484 360 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 HS3ST3A1Q9Y663 406 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 R4GN57 208 aa3.35□□□□□ -1.87
HMGB1P22-201ENST00000505315 LOC105371242A0A075B767 164 aa3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 TRBV5-3A0A0A0MS03 114 aa3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 A0A0G2JLL6 359 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 A0A1W2PP11 408 aa3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 TMEM191CA6NGB0 347 aa3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 PRR32B1ATL7 298 aa3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 PATE3B3GLJ2 98 aa3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 HSBP1L1C9JCN9 74 aa3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 WWP2O00308 870 aa3.34□□□□□ -1.87
HMGB1P22-201ENST00000505315 YKT6O15498 198 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms