RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 KCNS3Q9BQ31 491 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 YIPF2Q9BWQ6 316 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 BARHL1Q9BZE3 327 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 ROGDIQ9GZN7 287 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 MCOLN1Q9GZU1 580 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 MIR1-1HGQ9H1L0 117 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 TMEM245Q9H330 911 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 SPG21Q9NZD8 308 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 ACSL6Q9UKU0 697 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 SNX8Q9Y5X2 465 aa14.27□□□□□ -0.12
SNF8-203ENST00000504000 M0R129 80 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 SH3BGRLO75368 114 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 CSO75390 466 aaKnown RBP14.27□□□□□ -0.13
SNF8-203ENST00000504000 MFN2O95140 757 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 MAGP20916 626 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 HOXD10P28358 340 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 IRS1P35568 1242 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 LIM2P55344 173 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 COX10Q12887 443 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 C1DQ13901 141 aaKnown RBP14.27□□□□□ -0.13
SNF8-203ENST00000504000 LRRC73Q5JTD7 316 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 DCST1Q5T197 706 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 ATAD3CQ5T2N8 411 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 ASTLQ6HA08 431 aaPredicted RBP14.27□□□□□ -0.13
SNF8-203ENST00000504000 KIAA1211LQ6NV74 962 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 ERAP2Q6P179 960 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 CASP12Q6UXS9 341 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 VN1R5Q7Z5H4 357 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 DDX53Q86TM3 631 aaKnown RBP14.27□□□□□ -0.13
SNF8-203ENST00000504000 CLIP4Q8N3C7 705 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 LINC00471Q8N535 108 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 OR9A1PQ8NGU1 263 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 WDR48Q8TAF3 677 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 SLC5A11Q8WWX8 675 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 OR5P2Q8WZ92 322 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 ZNF764Q96H86 408 aaPredicted RBP14.27□□□□□ -0.13
SNF8-203ENST00000504000 CNPPD1Q9BV87 410 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 SLC6A16Q9GZN6 736 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 SRRQ9GZT4 340 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 AHSPQ9NZD4 102 aa14.27□□□□□ -0.13
SNF8-203ENST00000504000 TRBV4-1A0A0J9YWV2 114 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 HMX3A6NHT5 357 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 A8MU76 341 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 TPST2O60704 377 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 SEMA3DO95025 777 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 TGFB1P01137 390 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 TCEA1P23193 301 aaKnown RBP14.26□□□□□ -0.13
SNF8-203ENST00000504000 ELAVL4P26378 380 aaKnown RBP14.26□□□□□ -0.13
SNF8-203ENST00000504000 RFX2P48378 723 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 DGKGP49619 791 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 VASPP50552 380 aaPredicted RBP14.26□□□□□ -0.13
SNF8-203ENST00000504000 ATN1P54259 1190 aaPredicted RBP14.26□□□□□ -0.13
SNF8-203ENST00000504000 CASP9P55211 416 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 WDR5P61964 334 aaKnown RBP14.26□□□□□ -0.13
SNF8-203ENST00000504000 BNC1Q01954 994 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 TAP2Q03519 686 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 SCN1BQ07699 218 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 ASAH1Q13510 395 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 DOC2BQ14184 412 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 ARMC4Q5T2S8 1044 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 TCTN3Q6NUS6 607 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 KIAA0907Q7Z7F0 614 aaPredicted RBP14.26□□□□□ -0.13
SNF8-203ENST00000504000 OR8H2Q8N162 312 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 FAM26EQ8N5C1 309 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 SLC25A46Q96AG3 418 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 KIAA1143Q96AT1 154 aaPredicted RBP14.26□□□□□ -0.13
SNF8-203ENST00000504000 ZNF689Q96CS4 500 aaPredicted RBP14.26□□□□□ -0.13
SNF8-203ENST00000504000 MSLNLQ96KJ4 702 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 FUZQ9BT04 418 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 OR51B5Q9H339 312 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 SYNDIG1Q9H7V2 258 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 TRIM39Q9HCM9 518 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 NEUROD4Q9HD90 331 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 C14orf119Q9NWQ9 140 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 TAAR2Q9P1P5 351 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 SSR3Q9UNL2 185 aa14.26□□□□□ -0.13
SNF8-203ENST00000504000 DOCK6Q96HP0 2047 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 C5orf58C9J3I9 102 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 PI15O43692 258 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 DDCP20711 480 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 PDHA2P29803 388 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 RCVRNP35243 200 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 NKX2-5P52952 324 aaPredicted RBP14.25□□□□□ -0.13
SNF8-203ENST00000504000 LARS2Q15031 903 aaKnown RBP14.25□□□□□ -0.13
SNF8-203ENST00000504000 ZNF79Q15937 498 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 NDUFA9Q16795 377 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 GLYR1Q49A26 553 aaPredicted RBP14.25□□□□□ -0.13
SNF8-203ENST00000504000 CYP27C1Q4G0S4 372 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 ZNF648Q5T619 568 aaPredicted RBP14.25□□□□□ -0.13
SNF8-203ENST00000504000 XKRXQ6PP77 449 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 TMEM220Q6QAJ8 160 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 CEACAM20Q6UY09 585 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 HSDL2Q6YN16 418 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 SPATC1Q76KD6 591 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 ADIPOR2Q86V24 386 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 SLC34A3Q8N130 599 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 LILRA3Q8N6C8 439 aaPredicted RBP14.25□□□□□ -0.13
SNF8-203ENST00000504000 GDPD1Q8N9F7 314 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 OR5AK3PQ8NH89 298 aa14.25□□□□□ -0.13
SNF8-203ENST00000504000 SLC38A5Q8WUX1 472 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms