RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 PNO1Q9NRX1 252 aaKnown RBP14.35□□□□□ -0.11
NUP50-219ENST00000497960 PCDHGA11Q9Y5H2 935 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 SPACA6W5XKT8 324 aa14.35□□□□□ -0.11
NUP50-219ENST00000497960 GABRR3A8MPY1 467 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 DYNC1I1O14576 645 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 UGDHO60701 494 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 SEMA7AO75326 666 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 SH3BGRLO75368 114 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 RASAL1O95294 804 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 TSPAN8P19075 237 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 IMPDH1P20839 514 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 ATP5A1P25705 553 aaKnown RBP14.34□□□□□ -0.11
NUP50-219ENST00000497960 ALDH3A1P30838 453 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 PIK3CBP42338 1070 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 RAP1GDS1P52306 607 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 OC90Q02509 493 aaPredicted RBP14.34□□□□□ -0.11
NUP50-219ENST00000497960 TERF2Q15554 542 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 KHDRBS2Q5VWX1 349 aaKnown RBP14.34□□□□□ -0.11
NUP50-219ENST00000497960 RPS19BP1Q86WX3 136 aaKnown RBP14.34□□□□□ -0.11
NUP50-219ENST00000497960 KIF2BQ8N4N8 673 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 HORMAD2Q8N7B1 307 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 HUS1BQ8NHY5 278 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 MGARPQ8TDB4 240 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 SSC4DQ8WTU2 575 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 PAIP2Q9BPZ3 127 aaKnown RBP14.34□□□□□ -0.11
NUP50-219ENST00000497960 C1QTNF3Q9BXJ4 246 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 DEFB126Q9BYW3 111 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 CDCP1Q9H5V8 836 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 NOL11Q9H8H0 719 aaKnown RBP14.34□□□□□ -0.11
NUP50-219ENST00000497960 OXSMQ9NWU1 459 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 NKIRAS1Q9NYS0 192 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 STK38LQ9Y2H1 464 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 RELNP78509 3460 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 ICE1Q9Y2F5 2266 aa14.34□□□□□ -0.11
NUP50-219ENST00000497960 CPAMD8Q8IZJ3 1885 aa14.33□□□□□ -0.11
NUP50-219ENST00000497960 BLACEA4D250 179 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CYR61O00622 381 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CDK2AP1O14519 115 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CTNSO60931 367 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 MYO1DO94832 1006 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 OTCP00480 354 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CRYABP02511 175 aaKnown RBP14.33□□□□□ -0.12
NUP50-219ENST00000497960 HIST1H1TP22492 207 aaPredicted RBP14.33□□□□□ -0.12
NUP50-219ENST00000497960 CD96P40200 585 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 ETV4P43268 484 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 SSR2P43308 183 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CLCN2P51788 898 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 HNRNPFP52597 415 aaKnown RBP14.33□□□□□ -0.12
NUP50-219ENST00000497960 NAGLUP54802 743 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CDH13P55290 713 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 DNAJB13P59910 316 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CLCQ05315 142 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 TUBA3CQ13748 450 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 OR1C1Q15619 314 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 UNC50Q53HI1 259 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 ZNF766Q5HY98 468 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 DEPDC1Q5TB30 811 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 HHATQ5VTY9 493 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 TUBA3EQ6PEY2 450 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 ZNF793Q6ZN11 406 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 UBE3DQ7Z6J8 389 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CLNKQ7Z7G1 428 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 ACOT4Q8N9L9 421 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 NFAM1Q8NET5 270 aaPredicted RBP14.33□□□□□ -0.12
NUP50-219ENST00000497960 B3GNT7Q8NFL0 401 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 OR52B6Q8NGF0 335 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 DNAJB8Q8NHS0 232 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 PPP1R14CQ8TAE6 165 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 TRPC4APQ8TEL6 797 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 RGMAQ96B86 450 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 C5orf34Q96MH7 638 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 CSF3RQ99062 836 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 NPAS2Q99743 824 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 OR51B5Q9H339 312 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 ZBTB26Q9HCK0 441 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 ADAP2Q9NPF8 381 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 ANKRD10Q9NXR5 420 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 TSC22D4Q9Y3Q8 395 aa14.33□□□□□ -0.12
NUP50-219ENST00000497960 USP9YO00507 2555 aaPredicted RBP14.33□□□□□ -0.12
NUP50-219ENST00000497960 H0YIV9 168 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 SAP18O00422 153 aaKnown RBP14.32□□□□□ -0.12
NUP50-219ENST00000497960 RTCAO00442 366 aaKnown RBP14.32□□□□□ -0.12
NUP50-219ENST00000497960 OR7A17O14581 309 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 MAN1A2O60476 641 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 TRIM13O60858 407 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 SCELO95171 688 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 MLYCDO95822 493 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 DDAH2O95865 285 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 IFNA16P05015 189 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 BPGMP07738 259 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 NEFHP12036 1026 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 CD46P15529 392 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 PTX3P26022 381 aaPredicted RBP14.32□□□□□ -0.12
NUP50-219ENST00000497960 SERPINB4P48594 390 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 NAA20P61599 178 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 STX4Q12846 297 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 LCP2Q13094 533 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 TRAF3Q13114 568 aa14.32□□□□□ -0.12
NUP50-219ENST00000497960 CPSF6Q16630 551 aaKnown RBP eCLIP14.32□□□□□ -0.12
NUP50-219ENST00000497960 HSP90B2PQ58FF3 399 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms