RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 TOXO94900 526 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 S100BP04271 92 aaPredicted RBP20.45■□□□□ 0.86
HDDC3-203ENST00000494993 CNR1P21554 472 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 ATP5A1P25705 553 aaKnown RBP20.45■□□□□ 0.86
HDDC3-203ENST00000494993 PAFAH1B1P43034 410 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 MSH2P43246 934 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 GNG11P61952 73 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 PMPCAQ10713 525 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 E2F2Q14209 437 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 ZKSCAN8Q15776 578 aaPredicted RBP20.45■□□□□ 0.86
HDDC3-203ENST00000494993 GXYLT1Q4G148 440 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 ACAD11Q709F0 780 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 CCDC71Q8IV32 467 aaPredicted RBP20.45■□□□□ 0.86
HDDC3-203ENST00000494993 ACOT4Q8N9L9 421 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 GOLM1Q8NBJ4 401 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 BBOF1Q8ND07 529 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 OR5L2Q8NGL0 311 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 OR5M3Q8NGP4 307 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 ZNF473Q8WTR7 871 aaKnown RBP20.45■□□□□ 0.86
HDDC3-203ENST00000494993 UBXN10Q96LJ8 280 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 KRT12Q99456 494 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 NAPGQ99747 312 aaPredicted RBP20.45■□□□□ 0.86
HDDC3-203ENST00000494993 CPNE1Q99829 537 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 SAYSD1Q9NPB0 183 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 KCNJ16Q9NPI9 418 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 PNPLA3Q9NST1 481 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 RNF112Q9ULX5 631 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 LIPGQ9Y5X9 500 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 SPACA6W5XKT8 324 aa20.45■□□□□ 0.86
HDDC3-203ENST00000494993 OR14I1A6ND48 311 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 RTCAO00442 366 aaKnown RBP20.44■□□□□ 0.86
HDDC3-203ENST00000494993 ZNF354AO60765 605 aaPredicted RBP20.44■□□□□ 0.86
HDDC3-203ENST00000494993 IGHG3P01860 377 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 MSX1P28360 303 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 GP5P40197 560 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 CASP2P42575 452 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 ID2Q02363 134 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 OPN5Q6U736 354 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 LRRC70Q7Z2Q7 622 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 FAM109AQ8N4B1 249 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 TMEM251Q8N6I4 163 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 ZNF721Q8TF20 911 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 EXT2Q93063 718 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 ANKRD9Q96BM1 317 aaPredicted RBP20.44■□□□□ 0.86
HDDC3-203ENST00000494993 SGCZQ96LD1 299 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 SMC6Q96SB8 1091 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 CD244Q9BZW8 370 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 IL1RL2Q9HB29 575 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 SACM1LQ9NTJ5 587 aa20.44■□□□□ 0.86
HDDC3-203ENST00000494993 BCKDKO14874 412 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 SCELO95171 688 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 ETHE1O95571 254 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 HIST1H1TP22492 207 aaPredicted RBP20.43■□□□□ 0.86
HDDC3-203ENST00000494993 MAGEA5P43359 124 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 RAB10P61026 200 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 TMEM35AQ53FP2 167 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 SPNS3Q6ZMD2 512 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 FAM47EQ6ZV65 393 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 DMRTC2Q8IXT2 367 aaPredicted RBP20.43■□□□□ 0.86
HDDC3-203ENST00000494993 OR5M9Q8NGP3 310 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 UBE2E3Q969T4 207 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 PHACTR1Q9C0D0 580 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 PRM3Q9NNZ6 103 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 COPS7AQ9UBW8 275 aa20.43■□□□□ 0.86
HDDC3-203ENST00000494993 A0A1B0GVC2 190 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 TCRBV9S1A1TA0A576 114 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 FAM159BA6NKW6 160 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 EIF3HO15372 352 aaKnown RBP eCLIP20.42■□□□□ 0.86
HDDC3-203ENST00000494993 SH3BGRLO75368 114 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 P04436 131 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 COX7A2P14406 83 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 CPN2P22792 545 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 ACVR2AP27037 513 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 SSR2P43308 183 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 DNASE1L1P49184 302 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 MRPS25P82663 173 aaKnown RBP20.42■□□□□ 0.86
HDDC3-203ENST00000494993 CALCOCO2Q13137 446 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 AP5B1Q2VPB7 878 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 MED27Q6P2C8 311 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 CYS1Q717R9 158 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 TRILQ7L0X0 811 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 LAS2Q8IYD9 372 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 C7orf57Q8NEG2 295 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 NUDT4Q9NZJ9 180 aa20.42■□□□□ 0.86
HDDC3-203ENST00000494993 FIGNL2A6NMB9 653 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 FGF17O60258 216 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 TGFB1P01137 390 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 CCL3P10147 92 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 PCNAP12004 261 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 SERPINB1P30740 379 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 GMPRP36959 345 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 STT3AP46977 705 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 IGLV3-21P80748 117 aaPredicted RBP20.41■□□□□ 0.86
HDDC3-203ENST00000494993 FOXO1Q12778 655 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 MPEG1Q2M385 716 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 HYAL4Q2M3T9 481 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 PIGGQ5H8A4 983 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 ZNF585AQ6P3V2 769 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 CHSY3Q70JA7 882 aa20.41■□□□□ 0.86
HDDC3-203ENST00000494993 STAG3L4Q8TBR4 150 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms